Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30069
         (495 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   2.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   4.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   4.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = +2

Query: 209 IFNVWLNDEIEMVRVAAVFCSSISFANSRVSDDTKQIVSSFMLSISAVVMSYL 367
           +  VW+N  I   +        + F    VS+ TKQ     ++  S  V +YL
Sbjct: 451 VATVWINSVINRWKFIEFIRKVLEFDVKCVSNYTKQQSKIHLIVRSVFVTTYL 503


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
 Frame = -2

Query: 143 WFIATFSVS--ATWIC*QLHLSTFYYRPTNICSGY 45
           WFI   +    A W+C  LH +     P  I   Y
Sbjct: 225 WFINCTAKGRVAVWMCNNLHKALESRNPAKILGAY 259


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
 Frame = -2

Query: 143 WFIATFSVS--ATWIC*QLHLSTFYYRPTNICSGY 45
           WFI   +    A W+C  LH +     P  I   Y
Sbjct: 225 WFINCTAKGRVAVWMCNNLHKALESRNPAKILGAY 259


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 183 LWLGLLLEQKWVEV 142
           +WL  LL Q W+ V
Sbjct: 220 IWLVWLLSQAWISV 233


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 183 LWLGLLLEQKWVEV 142
           +WL  LL Q W+ V
Sbjct: 453 IWLVWLLSQAWISV 466


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 183 LWLGLLLEQKWVEV 142
           +WL  LL Q W+ V
Sbjct: 453 IWLVWLLSQAWISV 466


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 183 LWLGLLLEQKWVEVVYSDVLCQR 115
           +WL  LL Q W+ +      C+R
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCER 488


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 183 LWLGLLLEQKWVEVVYSDVLCQR 115
           +WL  LL Q W+ +      C+R
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCER 488


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 183 LWLGLLLEQKWVEVVYSDVLCQR 115
           +WL  LL Q W+ +      C+R
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCER 488


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -1

Query: 183 LWLGLLLEQKWVEVVYSDVLCQR 115
           +WL  LL Q W+ +      C+R
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCER 488


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,590
Number of Sequences: 336
Number of extensions: 2556
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)