Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30067X
         (311 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.18 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   0.43 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   0.43 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   2.3  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   3.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   4.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   4.0  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    19   9.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.18
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 292 IHIVFFCTNLKFFRTYYYENAFYSFS 215
           IH++F+C  +     YY+  AF  F+
Sbjct: 224 IHLLFYCVLIILLCIYYFYYAFILFT 249


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 0.43
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 146 QSPCV-NYNLSGFGANY*AIIPNSTERIKRIFIIICSE 256
           ++PC  NYN + +     AI+P   E  ++   +IC +
Sbjct: 315 EAPCPRNYNPADYFIQLLAIVPEKEESSRQAVNLICDK 352


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 0.43
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 146 QSPCV-NYNLSGFGANY*AIIPNSTERIKRIFIIICSE 256
           ++PC  NYN + +     AI+P   E  ++   +IC +
Sbjct: 315 EAPCPRNYNPADYFIQLLAIVPEKEESSRQAVNLICDK 352


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 2.3
 Identities = 9/33 (27%), Positives = 21/33 (63%)
 Frame = -1

Query: 140 FTSMMFACLILENTLQYWNYLAK*FFFFYLSRQ 42
           FT++ +  + L+N  +  + L K F+F+++ +Q
Sbjct: 113 FTNLQYIDINLQNKGKKESKLMKNFYFWFVLKQ 145


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 125 FACLILENTLQYWNYLAK*FFF 60
           F  +I  +TL + NY+   FFF
Sbjct: 204 FLLIISYSTLHFVNYIDDLFFF 225


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 275 LYKSKVFQNILL*KCVLFFQWNSELWLSN 189
           +Y++ V++ +   K VL    +  LWLSN
Sbjct: 121 VYQAPVYKELTDIKLVLNILSDVTLWLSN 149


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 275 LYKSKVFQNILL*KCVLFFQWNSELWLSN 189
           +Y++ V++ +   K VL    +  LWLSN
Sbjct: 47  VYQAPVYKELTDIKLVLNILSDVTLWLSN 75


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 19.4 bits (38), Expect = 9.2
 Identities = 5/14 (35%), Positives = 11/14 (78%)
 Frame = +1

Query: 88  QYCKVFSKIKQANI 129
           +YC+VF  +++ +I
Sbjct: 280 EYCRVFKMLQEEDI 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,320
Number of Sequences: 336
Number of extensions: 1465
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5730534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)