Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30060
         (593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   7.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.8  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   7.8  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 542 DISTTTGPCFFSPLVR 495
           D+  T+GP  F PL+R
Sbjct: 201 DVIKTSGPHKFQPLLR 216


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 315  FGNMKSSHRHLRYLVQS 265
            FG + S H HL  L++S
Sbjct: 1301 FGKLCSLHHHLSKLIKS 1317


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 235 RGSGDSQNDVRLYKIPKMTVAALHV 309
           R  G+     + Y IPK T+  +H+
Sbjct: 67  RALGEDVRTQKGYLIPKDTITIIHI 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,775
Number of Sequences: 336
Number of extensions: 2956
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)