Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30058
         (848 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    25   1.00 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    24   1.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   4.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   5.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   7.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   7.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   7.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.3  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 279 IEVKRSNIQSYAAENSAGNSQVILDSLNN 365
           IE K  NIQ    +N A   +++LD +N+
Sbjct: 455 IEQKVKNIQMLVYQNEAEEVKILLDVINH 483


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +3

Query: 279 IEVKRSNIQSYAAENSAGNSQVILDSLNNKYFFYTRTR--GLFRICYPK 419
           +E  R+  Q ++  +   +   ++  L+   +F +RT   GLF +CYP+
Sbjct: 111 VESLRAVAQQHSPADLENHFVPLVQRLSAGDWFTSRTSACGLFSVCYPR 159


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 466  TAVMWTTSFPTRTTNQRP 519
            T+  WTT+   RTT  RP
Sbjct: 1048 TSPWWTTTTTRRTTTTRP 1065



 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +1

Query: 442  STCRRWRLTAVMWTTSFPTRTTNQRPLRRCNEQATY 549
            ST   W+      TT+ PT T +Q    +C+    Y
Sbjct: 1178 STTNHWQTKTTTSTTTRPTTTVSQLIDDKCDSGQYY 1213


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 483 SPHYCSESPPATGRFQ 436
           SPHY + +PP    FQ
Sbjct: 414 SPHYVTPTPPEAPLFQ 429


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = +1

Query: 640 SRQH-HRHRYTDARHMSAVGGRYGTVARG*VL*KREGCRR 756
           S +H H+H++  A      GGR      G V   R GC R
Sbjct: 20  SAEHPHQHQHYGAAVQVPQGGRRRAARPGVVTTPRWGCAR 59


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +2

Query: 308  IRCGELGGQLAGHPRQLEQQIFLLHQNERSFPHLLP 415
            + C E  G ++ HP + + +++ + + ER   H +P
Sbjct: 913  VTCDEEEGHISYHPDKADCRMYYMCEGERK--HHMP 946


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +2

Query: 581 AFLTLFIAFWTGVVGCWKRSPGNITATAI--LMLVTCLLSAGAMALWHGVE 727
           A LT  + F  GVV  + R P +I       L + +    A +  +W  VE
Sbjct: 188 AMLTNAVCFVPGVVAMFSRKPCSINENLKMGLDIASITAQASSFVVWPLVE 238


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +2

Query: 581 AFLTLFIAFWTGVVGCWKRSPGNITATAI--LMLVTCLLSAGAMALWHGVE 727
           A LT  + F  GVV  + R P +I       L + +    A +  +W  VE
Sbjct: 188 AMLTNAVCFVPGVVAMFSRKPCSINENLKMGLDIASITAQASSFVVWPLVE 238


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 446 VDFNCRRSFFRVADAE 399
           V+FN R S+FR++ A+
Sbjct: 26  VNFNHRESYFRLSKAK 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,714
Number of Sequences: 336
Number of extensions: 3787
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)