Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30057
(750 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 31 0.013
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 31 0.013
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 4.6
DQ855490-1|ABH88177.1| 133|Tribolium castaneum chemosensory pro... 22 4.6
AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2 prot... 22 4.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 6.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 6.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 6.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 6.0
AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory recept... 21 8.0
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 30.7 bits (66), Expect = 0.013
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 48 SPECLDGASNLLKPGGISIPSSYRSYVAPITS 143
SP L G S+L PGG+ +PS S +P S
Sbjct: 683 SPGALSGLSSLTSPGGMVLPSPSTSVASPSVS 714
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 30.7 bits (66), Expect = 0.013
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 48 SPECLDGASNLLKPGGISIPSSYRSYVAPITS 143
SP L G S+L PGG+ +PS S +P S
Sbjct: 575 SPGALSGLSSLTSPGGMVLPSPSTSVASPSVS 606
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = -3
Query: 445 ITIKGTIKIPSKAMHNVVLLNIPSKGGLTPIVG*W*SSVI*FITSLFIL 299
+T+ TI + N+V IP+ P++G + + ++ + S +L
Sbjct: 243 LTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYFNCIMFMVASSVVL 291
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = -3
Query: 445 ITIKGTIKIPSKAMHNVVLLNIPSKGGLTPIVG*W*SSVI*FITSLFIL 299
+T+ TI + N+V IP+ P++G + + ++ + S +L
Sbjct: 243 LTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYFNCIMFMVASSVVL 291
>DQ855490-1|ABH88177.1| 133|Tribolium castaneum chemosensory
protein 4 protein.
Length = 133
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 608 TTHSYHTRRESTHLQNV 558
TTH Y T+ ++ L+NV
Sbjct: 22 TTHKYTTKYDNIDLENV 38
>AY873913-1|AAW67569.2| 377|Tribolium castaneum chitinase 2
protein.
Length = 377
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 312 DVINQITEDYH*PTIGV 362
DVIN +T D+H P G+
Sbjct: 197 DVINLMTYDFHIPGGGI 213
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 615 HFNYPFVPYTTRVNTPPERCCYFITLLYSHW-CL 517
H PF+ ++ E+ YFI + S W CL
Sbjct: 275 HSPIPFIKKLGKIKENLEQSRYFIYMFVSVWKCL 308
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 615 HFNYPFVPYTTRVNTPPERCCYFITLLYSHW-CL 517
H PF+ ++ E+ YFI + S W CL
Sbjct: 275 HSPIPFIKKLGKIKENLEQSRYFIYMFVSVWKCL 308
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 615 HFNYPFVPYTTRVNTPPERCCYFITLLYSHW-CL 517
H PF+ ++ E+ YFI + S W CL
Sbjct: 275 HSPIPFIKKLGKIKENLEQSRYFIYMFVSVWKCL 308
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.0
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 615 HFNYPFVPYTTRVNTPPERCCYFITLLYSHW-CL 517
H PF+ ++ E+ YFI + S W CL
Sbjct: 275 HSPIPFIKKLGKIKENLEQSRYFIYMFVSVWKCL 308
>AM292379-1|CAL23191.2| 376|Tribolium castaneum gustatory receptor
candidate 58 protein.
Length = 376
Score = 21.4 bits (43), Expect = 8.0
Identities = 4/11 (36%), Positives = 10/11 (90%)
Frame = -2
Query: 356 YCWLVVILCNL 324
Y W+++++CN+
Sbjct: 177 YLWVLILICNI 187
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,127
Number of Sequences: 336
Number of extensions: 5024
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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