Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30054
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    26   0.36 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.5  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   3.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.4  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.6  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   7.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.6  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 469 VDVTKLTQSRKIKYSLDNIRF*YIDPN 549
           ++VTK +++ K++  +DNI     DPN
Sbjct: 109 IEVTKTSETSKLQQLVDNIEHKLSDPN 135


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 201 CDMGMISLDLKHIYVVVKVKNILSVCCLVMRMF 299
           C +    LD K   VVV  + + S CC+ MR +
Sbjct: 561 CKVMKSILDNKVEKVVVSNRLVESPCCITMRRY 593


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 201 NNEGHYYHSLQSVHRAPYHQI*SH 130
           NN+ H++H+   +H A +H +  H
Sbjct: 318 NNQNHHHHAGHHIH-AQHHVVNHH 340


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 570 SYLYKISIRIYILKSNVIQ*ILNFTRLCQF 481
           SY Y    +   L++ ++Q +LNFT +  F
Sbjct: 106 SYKYSTVAKSAALRATMVQSVLNFTDVWGF 135


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 21/86 (24%), Positives = 41/86 (47%)
 Frame = -1

Query: 722 VHKSVLFSLIKSLGFREILI*HIFIISGWIRT*FVNSNYSIISYNFFMQLPLIFTRYPFG 543
           +HK + +S    +     L+ H F +  ++ +    +N + + + F  Q   IFT  P+ 
Sbjct: 140 LHKKIRYSAFGMIFVA--LLEHCFSMLNYVYSSKCENNSTGVEHFFKKQFHYIFTYMPYN 197

Query: 542 SIY*NLMLSSEYLILRDCVNFVTSTR 465
            ++  L L++  L+    VN VTS +
Sbjct: 198 IVF-GLCLTTFGLL---PVNGVTSEK 219


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 457 NGERVDVTK-LTQSRKIKYSLDNIRF*YIDPNGYLVK 564
           +  R D  K LTQ R I+     +RF Y+   G  +K
Sbjct: 267 DANRNDCAKPLTQIRNIRGPRKRLRFAYVTRTGANIK 303


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 606 VIAVYELSAYPTTDNEDVLYQN 671
           + A   L+AY   DN+ V Y N
Sbjct: 5   IFAFLALAAYVAADNKVVCYYN 26


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -3

Query: 225 LVKSSPYHNNEGHYYHSLQSVHRAPYHQ 142
           L   S  +++ GH+       H  P+HQ
Sbjct: 157 LTTQSMNNHHMGHHMQEQHPQHHQPHHQ 184


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -3

Query: 225 LVKSSPYHNNEGHYYHSLQSVHRAPYHQ 142
           L   S  +++ GH+       H  P+HQ
Sbjct: 159 LTTQSMNNHHMGHHMQEQHPQHHQPHHQ 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,579
Number of Sequences: 336
Number of extensions: 3568
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)