Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30053
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    25   0.50 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.2  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 527 PDGEWSRRPWTPAMPGAEP 471
           P  EW+R P TP+  G++P
Sbjct: 408 PRPEWARPPSTPSADGSKP 426


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 565 KNIFPSTIETSRMTVELFKFRIRSCNCQIIS 657
           +N+   T   S+ T  LFK   R+C+  II+
Sbjct: 195 QNVLVPTASNSKSTKVLFKDVDRNCSAYIIA 225


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 565 KNIFPSTIETSRMTVELFKFRIRSCNCQIIS 657
           +N+   T   S+ T  LFK   R+C+  II+
Sbjct: 195 QNVLVPTASNSKSTKVLFKDVDRNCSAYIIA 225


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 565 KNIFPSTIETSRMTVELFKFRIRSCNCQIIS 657
           +N+   T   S+ T  LFK   R+C+  II+
Sbjct: 195 QNVLVPTASNSKSTKVLFKDVDRNCSAYIIA 225


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 415 FDCGDYELHLESGGGRQRLGSAPGIAGV 498
           F+  DY+L+ E   GR++L     I G+
Sbjct: 9   FEITDYDLNNEFYRGRKKLSKHQQIYGI 36


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = +3

Query: 324 NFLTKIVMFIHRVTPDTLKLELVSLKWGWG 413
           NF  K        T D  KL     KW WG
Sbjct: 543 NFYRKFCARYSAATQDLNKLLRKGEKWRWG 572


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,934
Number of Sequences: 336
Number of extensions: 3970
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)