Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30045
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   5.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.3  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   5.3  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.9  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   9.2  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    21   9.2  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.2  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.2  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 433 PPVSAHPSPWPLPPISTSP 489
           PP++  PS W  P  +  P
Sbjct: 43  PPITYPPSDWNCPQYNAPP 61


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = -2

Query: 627 KTTEKLLSHLNLIENEVNHPDETVNNESNK 538
           +T+  + S++ +++ E    +   NN +NK
Sbjct: 438 ETSTTVFSNVEVVQEEAKKEESDSNNNNNK 467


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 433 PPVSAHPSPWPLPPISTSP 489
           PP++  PS W  P  +  P
Sbjct: 34  PPITYPPSDWNCPQYNAPP 52


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 618 EKLLSHLNLIENEVNHPDE 562
           E+L+  L   +NE  HP E
Sbjct: 316 EELIHRLVYFQNEYEHPSE 334


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 170 TDKRHLKNLLEYCRNEE 120
           + +RH KNL + CR  +
Sbjct: 259 SSRRHRKNLKDPCRRRQ 275


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 137 TPIDFLDVACRWR 175
           TP+DF+D  C  R
Sbjct: 56  TPLDFMDFRCYLR 68


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 137 TPIDFLDVACRWR 175
           TP+DF+D  C  R
Sbjct: 116 TPLDFMDFRCYLR 128


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 137 TPIDFLDVACRWR 175
           TP+DF+D  C  R
Sbjct: 116 TPLDFMDFRCYLR 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,705
Number of Sequences: 336
Number of extensions: 2715
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)