Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30010X
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   1.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.4  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   3.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   5.6  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   5.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.6  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.7  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.7  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   9.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   9.7  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   9.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.7  

>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 399 QTRRNPEWRMRTT 361
           QTRRNP +R RT+
Sbjct: 226 QTRRNPYYRPRTS 238


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 308 CSNTSSGTSYSHCRC 264
           C+  ++ T +SHC+C
Sbjct: 140 CTPNATNTVWSHCQC 154


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 308 CSNTSSGTSYSHCRC 264
           C+  ++ T +SHC+C
Sbjct: 140 CTPNATNTVWSHCQC 154


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 302 WNSLRLPHHRLFQ 340
           W  LR  H+RL+Q
Sbjct: 141 WKQLRYEHYRLYQ 153


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 368 EQLLFEGGVPGIAD 327
           EQ+L EGG P + D
Sbjct: 837 EQILAEGGCPNLYD 850


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 283 LVPELVLEQSSAPSSSAI 336
           LV E + ++S+APS SAI
Sbjct: 140 LVKEGICDRSTAPSVSAI 157


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 404 YGSVLSYDGVPAALRFVSYXXXXXXXXPSY 493
           Y S ++ DGV   L F+ Y        P+Y
Sbjct: 277 YNSKMTKDGVYNTLFFIVYVSLLLGPHPTY 306


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 286 VPELVLEQSSAPSSSAIPGTPPS 354
           VP+ V E +  PSS+  P  PPS
Sbjct: 393 VPQPVEEVTQKPSSTKAP-APPS 414


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 162 LCMGGYCCKWSHQ 124
           L +GG  C WS Q
Sbjct: 504 LVLGGEVCLWSEQ 516


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -1

Query: 251 NLAAESMSLVTDVVWKDRTA 192
           +L+   ++++TD++WK   A
Sbjct: 70  DLSVGLINVLTDIIWKTTVA 89


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 430 TIIRQNRPIASDKAKPRMAYENNCCLR 350
           T+I+  RP+A    +  +   NN  LR
Sbjct: 42  TVIQSKRPLAPAPERTSVLVTNNSDLR 68


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 91  QGRSVWRQTAFCFYKVRRATTKNTE 17
           Q   V +QTA CF   R  T   TE
Sbjct: 293 QPSQVHKQTAICFKAPRYHTLDITE 317


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 11/43 (25%), Positives = 16/43 (37%)
 Frame = -1

Query: 308 CSNTSSGTSYSHCRCTSTMNLAAESMSLVTDVVWKDRTAESCV 180
           C + SSG  Y+   C         S+      V K +   SC+
Sbjct: 41  CGDFSSGKHYNIFACDGCAGFFKRSIRRNRQYVCKAKDEGSCI 83


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 11/43 (25%), Positives = 16/43 (37%)
 Frame = -1

Query: 308 CSNTSSGTSYSHCRCTSTMNLAAESMSLVTDVVWKDRTAESCV 180
           C + SSG  Y+   C         S+      V K +   SC+
Sbjct: 41  CGDFSSGKHYNIFACDGCAGFFKRSIRRNRQYVCKAKDEGSCI 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,316
Number of Sequences: 336
Number of extensions: 2779
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)