Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10493
         (752 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    25   0.49 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   1.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   1.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   1.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.6  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    22   4.6  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 208 NSLILLLDDWKTTFICELNH 267
           + ++ +LDDW+ T + E+NH
Sbjct: 63  DGVVSVLDDWEITGLDEMNH 82


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 183 FLQV*RSKIHFTSETCNDLFSNFVLIN 103
           FL+V     HF S T N  F NFV+I+
Sbjct: 12  FLKVMYKLSHFLSITPNYDFENFVIIS 38


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 696 YTSFNITILLNNSKEAYFLRLNPLVVHLYY 607
           + S+NI +    S   YF R   L++ LYY
Sbjct: 192 FVSYNIYVCQTVSNFEYFQRKILLMIQLYY 221


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 696 YTSFNITILLNNSKEAYFLRLNPLVVHLYY 607
           + S+NI +    S   YF R   L++ LYY
Sbjct: 118 FVSYNIYVCQTVSNFEYFQRKILLMIQLYY 147


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +1

Query: 130  IITCFTCKVNFRALDLKKISHMVKTVNSLILL 225
            ++ CFTCK N + +    ++ ++ T  +LI++
Sbjct: 958  MLVCFTCKSNIQLI----VAQILSTGYALIMM 985


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +1

Query: 130  IITCFTCKVNFRALDLKKISHMVKTVNSLILL 225
            ++ CFTCK N + +    ++ ++ T  +LI++
Sbjct: 958  MLVCFTCKSNIQLI----VAQILSTGYALIMM 985


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +1

Query: 130  IITCFTCKVNFRALDLKKISHMVKTVNSLILL 225
            ++ CFTCK N + +    ++ ++ T  +LI++
Sbjct: 958  MLVCFTCKSNIQLI----VAQILSTGYALIMM 985


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +1

Query: 130  IITCFTCKVNFRALDLKKISHMVKTVNSLILL 225
            ++ CFTCK N + +    ++ ++ T  +LI++
Sbjct: 958  MLVCFTCKSNIQLI----VAQILSTGYALIMM 985


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 224 NNISEFTVLTMCE 186
           NN+++ T+LT CE
Sbjct: 31  NNLTQSTILTTCE 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,548
Number of Sequences: 336
Number of extensions: 3763
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)