Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10465
         (815 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.9  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   3.8  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   5.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   6.7  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   8.9  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.9  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 220 CSPAETSLRSVTTVGEQSPGSSSSRC 297
           C P + + RS+  V  + PG S   C
Sbjct: 88  CIPGDGNKRSIIVVNRKMPGPSVEVC 113


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = +3

Query: 21   EYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 149
            EYPKC+ V  +       +     +R  S     KN ++  A+
Sbjct: 2443 EYPKCWQVDCNKGPDSDKEAFAAFVRELSAAFKPKNLLLSAAV 2485


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = -1

Query: 614 LATPAWNLARRSSGLMSRISGAKIVP-ESYTCLTTRHMRMERCST 483
           L+TP+ + A +SSGL S +S +   P +  T  T++++     ST
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASST 173


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 300 LPHCQSSFPPTTPASVQRK-PLSSKLFPSLPKFQRVLLKSSTMYTS 434
           +P  Q + P       Q K PLSS  +PS+    ++L+ S  M  S
Sbjct: 1   MPLLQETTPKRDMLDSQEKTPLSSVSYPSMFTPSQLLMASHLMAAS 46



 Score = 21.4 bits (43), Expect = 8.9
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 116 HGKKHYDAQSHQRPPGQQSSPRETVATHQGQRWLRVH 226
           H K H    + +RP   +   R+ V     +R LRVH
Sbjct: 177 HLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVH 213


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 223 NTKPTLPLMCGNSFSRAGLL 164
           N KP +  +CG S++R   L
Sbjct: 246 NQKPNVCRICGKSYARPSTL 265


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 116 HGKKHYDAQSHQRPPGQQSSPRETVATHQGQRWLRVH 226
           H K H    + +RP   +   R+ V     +R LRVH
Sbjct: 24  HLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVH 60


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = -3

Query: 612 SNSSLELGTEILWFDVQNFRCKNSSRIIYLLNNKTYENG--EMFNMLRRVASEAPTLSP 442
           S++ +E  + + WF V+   CK S  +      K Y  G    +  L    S+ P L P
Sbjct: 389 SDAEIEKLSTVYWFTVEFGLCKESGVV------KAYGAGLLSAYGELLHALSDKPELRP 441


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,158
Number of Sequences: 336
Number of extensions: 4841
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)