Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10450
         (817 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.9  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   5.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   5.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   6.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.9  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 774 LLRWGRSDGKNEMPVSSRTIPQSTPHGTYG 685
           +  W  +D ++  P+ S+ +PQ   +G YG
Sbjct: 271 VFHWHLTDSQS-FPLVSQRVPQLAKNGAYG 299


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 342 RDTPWNCGAMTKGSFFAXNAQTCVFXGLNYPS 247
           R + W    + KG+  A N   CV+   ++PS
Sbjct: 358 RHSAWQSHWLNKGAEQAKNVLKCVWCKQSFPS 389


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 752 SDRPHRSRVHPYYLEHCGHPQC 817
           S+RPH+  + P   +H G   C
Sbjct: 181 SNRPHQGPLTPILYDHIGDLVC 202


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = -2

Query: 747 KNEMPV--SSRTIPQSTPHGTYGTKYRENRSPSADP 646
           K E P   S R     TPHG+  +      SPSA P
Sbjct: 239 KKESPQMQSYRPTGNITPHGSNTSSLITTPSPSASP 274


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 12  TINAGVPQGSVLSP 53
           T + G+PQG VL+P
Sbjct: 442 TYDYGIPQGVVLNP 455


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 12  TINAGVPQGSVLSP 53
           T + G+PQG VL+P
Sbjct: 442 TYDYGIPQGVVLNP 455


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 764 GGGPMVKTRCRYHLEQ 717
           GG  M K R RY L+Q
Sbjct: 567 GGNSMKKCRARYGLDQ 582


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 764 GGGPMVKTRCRYHLEQ 717
           GG  M K R RY L+Q
Sbjct: 459 GGNSMKKCRARYGLDQ 474


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 258 NYPSSIHPIWRL 223
           N PS  HP+W +
Sbjct: 347 NCPSRSHPVWEI 358


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 258 NYPSSIHPIWRL 223
           N PS  HP+W +
Sbjct: 354 NCPSRSHPVWEI 365


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +3

Query: 60  FILY--INDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVTEVENSLGRVSK 233
           F+ Y  I DML  +G H   D+S       G Q +     +    K+    E +LG V  
Sbjct: 453 FLAYFEICDMLLNEGWHKGMDESGSPYMVYGDQWVGYDDSESVEKKVNYVQEMNLGGVFI 512

Query: 234 W 236
           W
Sbjct: 513 W 513


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,450
Number of Sequences: 336
Number of extensions: 5452
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)