Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10447X
         (436 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.41 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.41 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   0.72 
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   0.95 
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   1.3  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   1.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.3  
AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan oxyge...    23   1.7  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.7  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.7  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   5.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   5.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.7  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 24.6 bits (51), Expect = 0.41
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 127 LKRFPSFPWL*RTSPGDQQDQTGCHLPE 210
           L+ +PS P++ R S  + Q +TG  +P+
Sbjct: 356 LRLYPSVPFISRVSGSEIQTKTGYTIPK 383


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 24.6 bits (51), Expect = 0.41
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 127 LKRFPSFPWL*RTSPGDQQDQTGCHLPE 210
           L+ +PS P++ R S  + Q +TG  +P+
Sbjct: 356 LRLYPSVPFISRVSGSEIQTKTGYTIPK 383


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.8 bits (49), Expect = 0.72
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +3

Query: 126 IEKIP--ELPLVVADKSRRSTRPNRLSSS*GASRHGLISLRC 245
           + KIP  E P   +  +  S  P   SS  G++   ++SL C
Sbjct: 211 VPKIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNC 252


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 0.95
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 127 LKRFPSFPWL*RTSPGDQQDQTGCHLPE 210
           L+ FPS P++ R +  D   +TG  +PE
Sbjct: 55  LRLFPSVPFISRYASEDFVTKTGNTIPE 82


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +3

Query: 132 KIP--ELPLVVADKSRRSTRPNRLSSS*GASRHGLISLRC 245
           KIP  E P   +  +  S  P   SS  G++   ++SL C
Sbjct: 2   KIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNC 41


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +3

Query: 132 KIP--ELPLVVADKSRRSTRPNRLSSS*GASRHGLISLRC 245
           KIP  E P   +  +  S  P   SS  G++   ++SL C
Sbjct: 2   KIPPAEFPTTSSSSALESPNPASRSSCLGSNTSSMLSLNC 41


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +3

Query: 126 IEKIP--ELPLVVADKSRRSTRPNRLSSS*GASRHGLISLRC 245
           + KIP  E P   +  +  S  P   SS  G++   ++SL C
Sbjct: 211 VPKIPPAEFPTTSSSSALESPDPASRSSCLGSNTSSMLSLNC 252


>AY052395-1|AAL15469.1|   76|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 76

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 168 TCPLQPGEARESFQ 127
           +CPL+P EA+E  Q
Sbjct: 2   SCPLRPSEAQEGDQ 15


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 168 TCPLQPGEARESFQ 127
           +CPL+P EA+E  Q
Sbjct: 2   SCPLRPSEAQEGDQ 15


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 168 TCPLQPGEARESFQ 127
           +CPL+P EA+E  Q
Sbjct: 2   SCPLRPSEAQEGDQ 15


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 31  TVASTSDSGERPWRQRLLLPASQRSFRL 114
           T    + SGERP+R RL   A   S  L
Sbjct: 66  TTHMRTHSGERPYRCRLCKKAFSDSSTL 93


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 31  TVASTSDSGERPWRQRLLLPASQRSFRL 114
           T    + SGERP+R RL   A   S  L
Sbjct: 322 TTHMRTHSGERPYRCRLCKKAFSDSSTL 349


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 80   NRCRQGRSPL 51
            NRC +GR PL
Sbjct: 1747 NRCGEGRHPL 1756


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,632
Number of Sequences: 336
Number of extensions: 1742
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)