Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10434X
         (308 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   1.3  
DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    22   1.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   1.3  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   1.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   1.3  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   2.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   2.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   5.2  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          19   9.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    19   9.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    19   9.0  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        19   9.0  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           19   9.0  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -2

Query: 229 DSWSSQLRRLQQTEAQSFHWCRRHGDS 149
           +++S++   + +  A  + W + HGDS
Sbjct: 152 NNFSAEENSVSEPPANFYPWMKAHGDS 178


>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 188 FRLLKTSQLGGPRVLNRRYREVYSSQLKH 274
           +RL   S+   P+++N +Y  + +  LK+
Sbjct: 5   YRLSLKSRQKAPKIVNSKYNSILNIALKN 33


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +2

Query: 188 FRLLKTSQLGGPRVLNRRYREVYSSQLKH 274
           +RL   S+   P+++N +Y  + +  LK+
Sbjct: 5   YRLSLKSRQKAPKIVNSKYNSILNIALKN 33


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -2

Query: 229 DSWSSQLRRLQQTEAQSFHWCRRHGDS 149
           +++S++   + +  A  + W + HGDS
Sbjct: 152 NNFSAEENSVSEPPANFYPWMKAHGDS 178


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -2

Query: 229 DSWSSQLRRLQQTEAQSFHWCRRHGDS 149
           +++S++   + +  A  + W + HGDS
Sbjct: 152 NNFSAEENSVSEPPANFYPWMKAHGDS 178


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 127 QLEGFNTSCLRDVDTNEK-IVLPSAEDVATGRTK 225
           +L  F  S + +   N K IV+P  ++V TG+ +
Sbjct: 247 RLHRFTKSVIAERQENFKEIVVPETDEVYTGKRR 280


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 127 QLEGFNTSCLRDVDTNEK-IVLPSAEDVATGRTK 225
           +L  F  S + +   N K IV+P  ++V TG+ +
Sbjct: 247 RLHRFTKSVIAERQENFKEIVVPETDEVYTGKRR 280


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 125  VSSKASTPAVSVTSTPMKRLCFRL 196
            V++    P +++TST    L F+L
Sbjct: 1393 VNAPPHAPQIALTSTTTNSLTFKL 1416


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +2

Query: 29  LPHQKYIDSEWPAP*VTLPP 88
           LP   Y  S+W  P    PP
Sbjct: 42  LPPITYPPSDWNCPQYNAPP 61


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 140 STPAVSVTSTPMKRLCFRLLKT 205
           +TP    T TP +R  FR++ +
Sbjct: 330 NTPLEVFTITPGRRYRFRMINS 351


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 140 STPAVSVTSTPMKRLCFRLLKT 205
           +TP    T TP +R  FR++ +
Sbjct: 330 NTPLEVFTITPGRRYRFRMINS 351


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +3

Query: 21  SIPFLIKNILIQNGLLRE*HSLPERPPQGRHRPEESARRLQHQ 149
           ++PF +  +  + G+L+        P Q     EES ++  HQ
Sbjct: 336 ALPFELLPLDSEPGMLKRKRQKYHDPSQLLRHVEESDKQRTHQ 378


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = +2

Query: 29 LPHQKYIDSEWPAP*VTLPP 88
          LP   Y  S+W  P    PP
Sbjct: 33 LPPITYPPSDWNCPQYNAPP 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,315
Number of Sequences: 336
Number of extensions: 1406
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)