Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10423
         (837 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.2  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   9.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.1  

>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
 Frame = -1

Query: 828 GPPRQPEEATK----PDPRSGGVPEPADS 754
           G  R  + ATK    P P S   PEPAD+
Sbjct: 245 GSSRSHQPATKSKPRPAPASRNAPEPADN 273


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/28 (28%), Positives = 11/28 (39%)
 Frame = +2

Query: 425 CISGPVHVESTVHSSARTIRCSCQTSTI 508
           C   P     T H    +  CSC + T+
Sbjct: 226 CKPNPCQNGGTCHDLVNSFSCSCPSGTL 253


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 287 FRCSVGSCDVTTCERDG 237
           F C VG+ +   C+R+G
Sbjct: 66  FGCLVGTPETLRCQREG 82


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -2

Query: 818 GSQKKQPSPIHALAEFQSPPTASRYKN 738
           G Q++  S  HAL+  ++PP    +++
Sbjct: 277 GPQQRVLSGYHALSGLKAPPGVEHFED 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,220
Number of Sequences: 336
Number of extensions: 4324
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)