Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10417
         (839 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   5.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   5.3  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    22   7.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   7.0  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 344 DIIIISKFPQTFLE 385
           D+I+IS F Q FLE
Sbjct: 225 DVIVISTFLQLFLE 238


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 344 DIIIISKFPQTFLE 385
           D+I+IS F Q FLE
Sbjct: 151 DVIVISTFLQLFLE 164


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 198 CSLCVLRLREI*QLNKN*RI 257
           C LC+LR  +   LN++ R+
Sbjct: 108 CKLCLLRFSQSGNLNRHMRV 127


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 198 CSLCVLRLREI*QLNKN*RI 257
           C LC+LR  +   LN++ R+
Sbjct: 364 CKLCLLRFSQSGNLNRHMRV 383


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,511
Number of Sequences: 336
Number of extensions: 3907
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)