Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30179
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    26   0.26 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    25   0.45 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    25   0.45 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.45 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   5.5  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   5.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.3  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   7.3  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   7.3  
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    21   9.7  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 52  EVFDD---FLRSYLKNFSRKSLDTDEFKAYLFNYFQDNEKLKSVDWETWLYKSGMPPVIP 222
           ++FD+   F R  +KNF+   + T     ++  YFQD  ++  + W  + YK    PV+ 
Sbjct: 109 KIFDESVIFERKVMKNFAILIIPTC-VAMFIVPYFQDRREMPLIVWFPFDYKQ---PVVF 164

Query: 223 D 225
           D
Sbjct: 165 D 165


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 315 TFTPHQIMIFLQEL-IKHPPLPLDIL 389
           TFT  QIM++LQ + +K  P P  I+
Sbjct: 208 TFTSLQIMVYLQHIFVKSRPSPATII 233


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 315 TFTPHQIMIFLQEL-IKHPPLPLDIL 389
           TFT  QIM++LQ + +K  P P  I+
Sbjct: 208 TFTSLQIMVYLQHIFVKSRPSPATII 233


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 315 TFTPHQIMIFLQEL-IKHPPLPLDIL 389
           TFT  QIM++LQ + +K  P P  I+
Sbjct: 528 TFTSLQIMVYLQHIFVKSRPSPATII 553


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 173 LIGKHGCTRAVC 208
           L+G+ GC + VC
Sbjct: 134 LVGREGCKKGVC 145


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
          subunit protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 80 YDRRKSSNTSGPPIK 36
          YD+R   N  GPP++
Sbjct: 52 YDKRVRPNYGGPPVE 66


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 631 SNCLDFLTSSPIGRGL*YSGRTYPASRPLMWVHKIEHF 518
           S+CL   TSS +      +GRT   ++ L  + K  HF
Sbjct: 237 SSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHF 274


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 631 SNCLDFLTSSPIGRGL*YSGRTYPASRPLMWVHKIEHF 518
           S+CL   TSS +      +GRT   ++ L  + K  HF
Sbjct: 26  SSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHF 63


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 631 SNCLDFLTSSPIGRGL*YSGRTYPASRPLMWVHKIEHF 518
           S+CL   TSS +      +GRT   ++ L  + K  HF
Sbjct: 26  SSCLGSNTSSMLSLNCLNTGRTNFTNKQLTELEKEFHF 63


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 563 VCPSTVLETSTDWGRR 610
           VC +  L  STDWG+R
Sbjct: 16  VCTAQ-LNFSTDWGKR 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,868
Number of Sequences: 336
Number of extensions: 3800
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)