Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30149
         (866 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    25   0.58 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   7.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   7.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   7.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   7.2  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +1

Query: 16  LALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIP 141
           + LWD    E   RL   +  +  VIL   ++   + LEN+P
Sbjct: 396 IKLWDMFQNESLTRLYKKAGKEIPVILWTSTLTQKEYLENLP 437


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 769 KKFKWTRGKQGSPQ 728
           K+ KW  G++GSP+
Sbjct: 10  KRMKWEGGEEGSPE 23


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 377 RAALQVKKKKKTRVGFFFPFSPCCKC 454
           RA  + KK+ KTR  F + F    KC
Sbjct: 39  RALGKSKKEFKTRTYFIYAFVAPVKC 64


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 377 RAALQVKKKKKTRVGFFFPFSPCCKC 454
           RA  + KK+ KTR  F + F    KC
Sbjct: 272 RALGKSKKEFKTRTYFIYAFVAPVKC 297


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 377 RAALQVKKKKKTRVGFFFPFSPCCKC 454
           RA  + KK+ KTR  F + F    KC
Sbjct: 272 RALGKSKKEFKTRTYFIYAFVAPVKC 297


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 352 YTFLAFGRAFQICKRVNLFSHSPAF 278
           +  L F   F+ C R+N  S  P+F
Sbjct: 397 FILLRFLSVFESCTRLNNESRKPSF 421


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,583
Number of Sequences: 336
Number of extensions: 4558
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)