Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30142
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.16 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    24   0.86 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   0.86 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   4.6  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   6.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   6.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   6.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   6.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   6.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   6.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   6.1  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   6.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   6.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.1  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   8.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 521 FFWYDIVM*MHMIYLYCNYYFKLYFF 598
           F++  I+  +H+++L C YYF +  F
Sbjct: 116 FYYAFIIFTVHLLFLLCIYYFVVPLF 141



 Score = 25.4 bits (53), Expect = 0.37
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = +2

Query: 482 VTFN*INYKQTISFFWYDIVM*MHMIYLYCNYYFKLY 592
           + F   N ++   F+   I   +H+++L C+ YF ++
Sbjct: 46  LVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVH 82



 Score = 25.0 bits (52), Expect = 0.50
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 536 IVM*MHMIYLYCNYYF 583
           I+  MH+++L C YYF
Sbjct: 273 IIFTMHLLFLLCIYYF 288



 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +2

Query: 515 ISFFWYDIVM*-MHMIYLYCNYYF 583
           I +F+Y  ++  +H++ L C YYF
Sbjct: 238 IYYFYYAFILFTVHLLLLVCIYYF 261



 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 521 FFWYDIVM*MHMIYLYCNYYF 583
           F+   I+  +H+++L C Y+F
Sbjct: 149 FYCAFIIFTVHLLFLLCIYHF 169



 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 548 MHMIYLYCNYYFKLY 592
           MH+++L C  YF L+
Sbjct: 191 MHLLFLLCLDYFTLH 205



 Score = 21.8 bits (44), Expect = 4.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 548 MHMIYLYCNYYF 583
           +H+++L C YYF
Sbjct: 204 LHLLFLPCIYYF 215


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 601 RKKI*FKIIITVQVDHVHLHNNVIPKKRYSLFI 503
           +K + FK++  +++  V  HNN+  K  Y LF+
Sbjct: 89  KKPLWFKLLKNLKM--VQNHNNIREKSHYCLFV 119


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 601 RKKI*FKIIITVQVDHVHLHNNVIPKKRYSLFI 503
           +K + FK++  +++  V  HNN+  K  Y LF+
Sbjct: 89  KKPLWFKLLKNLKM--VQNHNNIREKSHYCLFV 119


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = +3

Query: 153 SRSVLLPICVPTPADRPSRSAYSTIGRSSLETRATSEQALQRCTG 287
           S  +  P   P PA   S S  S    +S      +++A   C G
Sbjct: 24  SSGMTSPAAAPPPATTSSGSPASVASNASAPLHIPAKRAAYDCEG 68


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +1

Query: 169 CRFAFQHRRTGLPAVRIRPLAGPPWRPVRPQSKPYNVVQETRKRKGLKEGL 321
           C++A     TG+ + +     G P R   P S P N      K  GL   L
Sbjct: 99  CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +1

Query: 169 CRFAFQHRRTGLPAVRIRPLAGPPWRPVRPQSKPYNVVQETRKRKGLKEGL 321
           C++A     TG+ + +     G P R   P S P N      K  GL   L
Sbjct: 99  CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +1

Query: 169 CRFAFQHRRTGLPAVRIRPLAGPPWRPVRPQSKPYNVVQETRKRKGLKEGL 321
           C++A     TG+ + +     G P R   P S P N      K  GL   L
Sbjct: 99  CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 116 PMFIVKAYLPVNESFGFT 169
           P F      P+N SF FT
Sbjct: 629 PTFTALGLFPINGSFAFT 646


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 133 LHNEHRCTCHLGLF 92
           +H  H+CTC  G +
Sbjct: 356 IHAGHKCTCPEGFY 369


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +1

Query: 169 CRFAFQHRRTGLPAVRIRPLAGPPWRPVRPQSKPYNVVQETRKRKGLKEGL 321
           C++A     TG+ + +     G P R   P S P N      K  GL   L
Sbjct: 99  CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +1

Query: 169 CRFAFQHRRTGLPAVRIRPLAGPPWRPVRPQSKPYNVVQETRKRKGLKEGL 321
           C++A     TG+ + +     G P R   P S P N      K  GL   L
Sbjct: 99  CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +1

Query: 169 CRFAFQHRRTGLPAVRIRPLAGPPWRPVRPQSKPYNVVQETRKRKGLKEGL 321
           C++A     TG+ + +     G P R   P S P N      K  GL   L
Sbjct: 55  CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 103


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +1

Query: 169 CRFAFQHRRTGLPAVRIRPLAGPPWRPVRPQSKPYNVVQETRKRKGLKEGL 321
           C++A     TG+ + +     G P R   P S P N      K  GL   L
Sbjct: 99  CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +1

Query: 169 CRFAFQHRRTGLPAVRIRPLAGPPWRPVRPQSKPYNVVQETRKRKGLKEGL 321
           C++A     TG+ + +     G P R   P S P N      K  GL   L
Sbjct: 99  CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = +1

Query: 169 CRFAFQHRRTGLPAVRIRPLAGPPWRPVRPQSKPYNVVQETRKRKGLKEGL 321
           C++A     TG+ + +     G P R   P S P N      K  GL   L
Sbjct: 99  CKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSN--SNATKSSGLTSPL 147


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -3

Query: 601 RKKI*FKIIITVQVDHVHLHNNVIPKKRY 515
           +KK+  +I +T+Q +H  +  NV+   +Y
Sbjct: 302 QKKLQKEIDLTLQENHGKISYNVLQSMKY 330


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 252 HGSPGRTCQWSNTHC 208
           +G  G+TC   ++HC
Sbjct: 134 NGWKGKTCSLKDSHC 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,691
Number of Sequences: 336
Number of extensions: 3115
Number of successful extensions: 25
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)