Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30139
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    25   0.79 
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    25   0.79 
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   1.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   7.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.7  

>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = +3

Query: 246 PSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPA 386
           P  H+   +Q +  + T   APA + + +   +   HS+++  T+PA
Sbjct: 12  PKYHQQFHHQQLFQSATTE-APAAYSSSSPSGSSPQHSSSSASTSPA 57



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 18/63 (28%), Positives = 26/63 (41%)
 Frame = +3

Query: 237 PCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIHATSAIHQV 416
           P + SS   S     HS+ +   +PA    P   AA   H A     A A  A ++   V
Sbjct: 32  PAAYSSSSPSGSSPQHSSSSASTSPAARMYPYVSAAHHHHQA----AAAAFGAAASGSMV 87

Query: 417 PAY 425
           P++
Sbjct: 88  PSF 90


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = +3

Query: 246 PSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPA 386
           P  H+   +Q +  + T   APA + + +   +   HS+++  T+PA
Sbjct: 12  PKYHQQFHHQQLFQSATTE-APAAYSSSSPSGSSPQHSSSSASTSPA 57



 Score = 23.4 bits (48), Expect = 1.8
 Identities = 18/63 (28%), Positives = 26/63 (41%)
 Frame = +3

Query: 237 PCSPSSHEASSYQAIHSAPTYHVAPAGHEAPTYHAAPAAHSATTYHTAPAIHATSAIHQV 416
           P + SS   S     HS+ +   +PA    P   AA   H A     A A  A ++   V
Sbjct: 32  PAAYSSSSPSGSSPQHSSSSASTSPAARMYPYVSAAHHHHQA----AAAAFGAAASGSMV 87

Query: 417 PAY 425
           P++
Sbjct: 88  PSF 90


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 195 CCSSYPHHPRSSYLPCSPSSH 257
           C ++YP++    YL  S  SH
Sbjct: 252 CYNNYPYYSNMDYLSSSTMSH 272



 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 291 PTYHVAPAGHEAPTYHAAPAAHSATTYHTAPA 386
           P  HV+     +PT  +A   +SA +   +PA
Sbjct: 191 PQLHVSTGSTSSPTIASATYTNSANSSIWSPA 222


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = -1

Query: 380 SCMICSCRVSSWSCMVGRSFVAC 312
           +C+I   R+  W+ + G  F  C
Sbjct: 146 NCVIYFNRIFGWNILFGHIFTVC 168


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 568 LHTGRPTNLNNE 603
           LHTG PT+L  E
Sbjct: 216 LHTGEPTDLTPE 227


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +1

Query: 424 TIQHQLFMKLQLFTF 468
           +++HQL+ K+Q +T+
Sbjct: 33  SLEHQLWQKIQAWTY 47


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 563  EPSTPGDPQIST 598
            EP TP  PQ++T
Sbjct: 1008 EPVTPAPPQVTT 1019


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 127 GGWFDHGARYSETI 86
           GGW + G++YS  +
Sbjct: 102 GGWAEGGSKYSAMV 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,710
Number of Sequences: 336
Number of extensions: 3804
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)