Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30116
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -3

Query: 168 DIRQ*FFFRNLYEILWVVKIRFFFKVLFLIVTLRSWIRFFIAFFLSHF 25
           ++ Q  +F  ++  +W   + FF  VLF+++     + FF   F   F
Sbjct: 290 NLEQSRYFIYMFVSVWKCLL-FFVSVLFILLVKEGEVAFFFTQFSEGF 336


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -3

Query: 168 DIRQ*FFFRNLYEILWVVKIRFFFKVLFLIVTLRSWIRFFIAFFLSHF 25
           ++ Q  +F  ++  +W   + FF  VLF+++     + FF   F   F
Sbjct: 290 NLEQSRYFIYMFVSVWKCLL-FFVSVLFILLVKEGEVAFFFTQFSEGF 336


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -3

Query: 168 DIRQ*FFFRNLYEILWVVKIRFFFKVLFLIVTLRSWIRFFIAFFLSHF 25
           ++ Q  +F  ++  +W   + FF  VLF+++     + FF   F   F
Sbjct: 290 NLEQSRYFIYMFVSVWKCLL-FFVSVLFILLVKEGEVAFFFTQFSEGF 336


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/48 (25%), Positives = 23/48 (47%)
 Frame = -3

Query: 168 DIRQ*FFFRNLYEILWVVKIRFFFKVLFLIVTLRSWIRFFIAFFLSHF 25
           ++ Q  +F  ++  +W   + FF  VLF+++     + FF   F   F
Sbjct: 290 NLEQSRYFIYMFVSVWKCLL-FFVSVLFILLVKEGEVAFFFTQFSEGF 336


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 365 SNPQNAAEAVKATNNCKLD 421
           SNPQN  +   A   CK D
Sbjct: 463 SNPQNEVDGSVAPKECKQD 481


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 405 FVAFTASAAFCGLLYSRKMYPVVSPLSVV 319
           F      AA CG+L +  + P+  P ++V
Sbjct: 456 FAMLELKAAICGILANFTLEPIDIPETIV 484


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 405 FVAFTASAAFCGLLYSRKMYPVVSPLSVV 319
           F      AA CG+L +  + P+  P ++V
Sbjct: 456 FAMLELKAAICGILANFTLEPIDIPETIV 484


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 479  PKEWEPPAPQHS 514
            P EW PP P  S
Sbjct: 1371 PTEWHPPIPPTS 1382


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 142 ESLRNPLGRQNQVLLQSSVPHCH 74
           E + N L R++      S+P CH
Sbjct: 357 EIVMNELDRRDDPTFDESLPGCH 379


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 142 ESLRNPLGRQNQVLLQSSVPHCH 74
           E + N L R++      S+P CH
Sbjct: 364 EIVMNELDRRDDPTFDESLPGCH 386


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,562
Number of Sequences: 336
Number of extensions: 3774
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)