Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30114
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       30   0.017
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    24   1.1  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   1.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   1.9  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    23   2.5  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    23   2.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   3.3  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   4.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.8  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   5.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   7.7  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 30.3 bits (65), Expect = 0.017
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 335 YKIEDPHTGDLKSQHETRDGDVVKGYYSLHEADGSIRVVEYSAD 466
           Y +E  +    + +  T DG +V  Y  +   DGS+R V Y+AD
Sbjct: 195 YVVEGRNYRKYRVEERTSDGFIVGEYGVVSHDDGSLRGVRYTAD 238


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 519 GMLCGAVCLTTALKPLCLSAEYSTTRIDPSASC 421
           G LC        + PL L   ++ T I+PSA C
Sbjct: 168 GFLCNNYLPLPQVPPLPLPPIFAPTMINPSAIC 200


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 457 LRRQAQWFQRSRQAHCSAKHAEPVQQYYHH 546
           L+R      ++  A C+ KH E V++  HH
Sbjct: 60  LKRDIPEALQNECAKCNEKHKEGVRKVLHH 89


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
 Frame = +2

Query: 233 RCTRARAYHEHAP----VHHGDQPQYEDYDAHPKYAFEYKIEDPHTGDLKSQHETRDGDV 400
           R +R R Y+   P     ++ + P  E+Y  H  Y   Y+ E P+       H + DG  
Sbjct: 343 RMSRGRQYNYPNPQQQYYYNKNHPNSENYINHQNYVQGYQGEHPNYNHY-GYHYSGDGGE 401

Query: 401 VKGYYSLH 424
           V    + H
Sbjct: 402 VAHLPNTH 409


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
 Frame = +2

Query: 233 RCTRARAYHEHAP----VHHGDQPQYEDYDAHPKYAFEYKIEDPHTGDLKSQHETRDGDV 400
           R +R R Y+   P     ++ + P  E+Y  H  Y   Y+ E P+       H + DG  
Sbjct: 291 RMSRGRQYNYPNPQQQYYYNKNHPNSENYINHQNYVQGYQGEHPNYNHY-GYHYSGDGGE 349

Query: 401 VKGYYSLH 424
           V    + H
Sbjct: 350 VAHLPNTH 357


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 496 AHCSAKHAEPVQQYYHH 546
           A C+ KH E V++  HH
Sbjct: 73  AKCNEKHKEGVRKVIHH 89


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 496 AHCSAKHAEPVQQYYHH 546
           A C+ KH E V++  HH
Sbjct: 73  AKCNEKHKEGVRKVIHH 89


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 519 GMLCGAVCLTTALKPLCLSAEYSTTRIDPSASC 421
           G LC        + PL L   +  T I+PSA C
Sbjct: 168 GFLCNNYPPLPQVPPLPLPPIFPPTMINPSAIC 200


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 335 IQMHIWDEHHN 303
           + +HI+D HHN
Sbjct: 86  VHLHIYDMHHN 96


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 335 IQMHIWDEHHN 303
           + +HI+D HHN
Sbjct: 403 VNLHIYDLHHN 413


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
 Frame = -1

Query: 377 VGSSGPQCEGLRF----CIQMHIWDEHHN 303
           +G     C GL+        +HI+D HHN
Sbjct: 86  LGEDFVTCNGLKLPKSTITHLHIYDLHHN 114


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 335 IQMHIWDEHHN 303
           + +HI+D HHN
Sbjct: 403 VNLHIYDLHHN 413


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 439 YPCCGILRRQAQW 477
           Y C G++R   QW
Sbjct: 64  YDCEGVIRHHGQW 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,743
Number of Sequences: 336
Number of extensions: 3773
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)