Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30102
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.81 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   1.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.5  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   7.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   7.5  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 13  SHEVKRFVPGNGHARSCS 66
           +HE+K+ +PG    +SCS
Sbjct: 769 NHEIKKVIPGRITQKSCS 786


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +2

Query: 212 GRPDKQPCSSSDVKGHSCYRPRRDGERKRKSVRGCIV 322
           GR D  P S +     SC   ++ G   R+    C+V
Sbjct: 154 GREDLSPSSLNGYSADSCDSKKKKGPTPRQQEELCLV 190


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -2

Query: 526 HFLFLPGWEHAFDDITTYIIFFAKVEQLTDFGSTFG 419
           H+     + H F+ +  Y ++ A + Q+++  +TFG
Sbjct: 499 HYYVNVTFPHLFNGLVDYSLWKALIFQISNLQTTFG 534


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 46  GHARSCSKWWT 78
           GH  SC+++WT
Sbjct: 107 GHETSCTRYWT 117


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 487 RQTRAPSQEGKENAKPRHKAPKI 555
           R T + S EG+ +A+PR    K+
Sbjct: 45  RSTSSQSTEGENDARPRASQVKL 67


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 75  PPLRTTSGMPVAGYETFNFMTAVNP 1
           PP + T  +P  GY  F F  A NP
Sbjct: 641 PPSKDTIAVPNNGYVIFRF-RADNP 664


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 85  LCSSTTSNNFWHARC 41
           LC+S T +NF + +C
Sbjct: 163 LCNSVTFSNFGYKQC 177


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 85  LCSSTTSNNFWHARC 41
           LC+S T +NF + +C
Sbjct: 396 LCNSVTFSNFGYKQC 410


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 85  LCSSTTSNNFWHARC 41
           LC+S T +NF + +C
Sbjct: 396 LCNSVTFSNFGYKQC 410


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,793
Number of Sequences: 336
Number of extensions: 3464
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)