Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30093
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    25   0.49 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.6  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   6.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   6.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   6.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   6.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.0  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 614 YGQPVTFDLVTCGMALPAFKNRFVNTSTSS 525
           Y QPV FDLV   +A       + N ST +
Sbjct: 158 YKQPVVFDLVYFILAFACISIAYTNVSTDA 187


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 717 LLFDQWKPYPIMCDW 673
           + F  W PY +MC W
Sbjct: 283 VFFVCWTPYYVMCIW 297


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 717 LLFDQWKPYPIMCDW 673
           + F  W PY +MC W
Sbjct: 283 VFFVCWTPYYVMCIW 297


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 183 CTFGCCTLPRSIQVQDKEGALHCSEASTQANLFI 284
           C+ GC +L R   + DK      +  STQA  ++
Sbjct: 226 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 259


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 183 CTFGCCTLPRSIQVQDKEGALHCSEASTQANLFI 284
           C+ GC +L R   + DK      +  STQA  ++
Sbjct: 540 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 573


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 183 CTFGCCTLPRSIQVQDKEGALHCSEASTQANLFI 284
           C+ GC +L R   + DK      +  STQA  ++
Sbjct: 773 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 806


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 183 CTFGCCTLPRSIQVQDKEGALHCSEASTQANLFI 284
           C+ GC +L R   + DK      +  STQA  ++
Sbjct: 773 CSPGCFSLFRGKALMDKSVMKKYTTRSTQAKHYV 806


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +2

Query: 407  WKLRHCDWTQS 439
            W   HCDW ++
Sbjct: 2271 WNKDHCDWPEN 2281


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 487 TFLAPDGSFTLVR 449
           T   PDG FT++R
Sbjct: 579 TVTVPDGGFTIIR 591


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,440
Number of Sequences: 336
Number of extensions: 4682
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)