Silkworm BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30068
         (572 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.4  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.3  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   5.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
 Frame = -3

Query: 195 RHLRAVLLEPVDAEC-----PYGSREAENLRVDPRRTLGHGLARAG 73
           RHLR   L P+         PYG+  +E +  DP+    + + R+G
Sbjct: 536 RHLRGNELLPMQQSQNPPTKPYGTCRSEGIFSDPKNCAAYYVCRSG 581


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 159 HRQVQEELLADGERV 203
           HR+VQEE+L + E V
Sbjct: 317 HREVQEEILKEMEAV 331


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 159 HRQVQEELLADGERV 203
           HR+VQEE+L + E V
Sbjct: 317 HREVQEEILKEMEAV 331


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 278 ARSGRRGHGPCQGQRAL 328
           A  GRRG GP + +R L
Sbjct: 325 AGGGRRGPGPARSRRHL 341


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 204 QPRPAQHVPAAH 239
           +P+P+QH P  H
Sbjct: 100 EPQPSQHCPRKH 111


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 230  RGPRVPPPDGPISEGDARS 286
            +G  VPPP G    G   S
Sbjct: 1107 KGTAVPPPSGSSGPGSTGS 1125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,101
Number of Sequences: 336
Number of extensions: 2609
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)