Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30049
(727 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 46 4e-07
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 26 0.27
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 26 0.27
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 26 0.27
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 26 0.27
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 26 0.27
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 25 0.83
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 24 1.4
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 23 2.5
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 2.5
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 23 3.3
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 23 3.3
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 23 3.3
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 23 3.3
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 22 4.4
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 22 5.8
AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory recept... 22 5.8
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 22 5.8
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 21 7.7
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 21 7.7
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 21 7.7
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 7.7
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 45.6 bits (103), Expect = 4e-07
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = +3
Query: 102 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 257
+ +F+ L+ LL + G+ KP+AIQ+ AI + GRD+++ AQ+G+GK
Sbjct: 157 ITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGK 208
Score = 26.6 bits (56), Expect = 0.20
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 478 ALQGRVYDMIIVVRFHANTIKLFVLDEAD 564
A GR+ D + N++K FVLDEAD
Sbjct: 291 ATPGRLKDFVNRGNVSFNSLKYFVLDEAD 319
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 320 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 427
+I++PTRELA QI + K GGT+
Sbjct: 239 VIMSPTRELAIQIADQGKKFAYNSTVKVAVIYGGTS 274
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 26.2 bits (55), Expect = 0.27
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -3
Query: 131 FEVHVIEGFDNLIPVGVQVSQGPFPEVHR--NYLDPSMAH 18
F H++ G + +I VG Q+ PF R N+L P H
Sbjct: 673 FLFHIVIGMNLIIHVGTQLIYRPFSHFPRCGNHLPPISLH 712
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 325 PGSHKRAGPTNSEGGDSSW 381
PG+ K+ GP + +SW
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 26.2 bits (55), Expect = 0.27
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 214 KDAMLSLKPSQELENCYFLYIDSTTNRYKH----S*MSSFDPGSHKRAGPTNSEGGDSS 378
K +++++ S E+ N +I+ T + H MS+ G H G EGGD S
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 26.2 bits (55), Expect = 0.27
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 214 KDAMLSLKPSQELENCYFLYIDSTTNRYKH----S*MSSFDPGSHKRAGPTNSEGGDSS 378
K +++++ S E+ N +I+ T + H MS+ G H G EGGD S
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 26.2 bits (55), Expect = 0.27
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 214 KDAMLSLKPSQELENCYFLYIDSTTNRYKH----S*MSSFDPGSHKRAGPTNSEGGDSS 378
K +++++ S E+ N +I+ T + H MS+ G H G EGGD S
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 26.2 bits (55), Expect = 0.27
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 214 KDAMLSLKPSQELENCYFLYIDSTTNRYKH----S*MSSFDPGSHKRAGPTNSEGGDSS 378
K +++++ S E+ N +I+ T + H MS+ G H G EGGD S
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 24.6 bits (51), Expect = 0.83
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = -1
Query: 502 YHIHDPGVPTTYMNTTLQLANIFTDIGATNASMAFSIQVITKSYHHLLNLLGQLSCGSQD 323
+ +H G Q+AN TD + S+A S +++ H L + + G+Q
Sbjct: 190 WDVHSTGSWLDMSGGMHQMANYSTDYSSLTHSLAASNHLLSSGQHLLQDTYKSMLPGAQT 249
Query: 322 QSLTF 308
+F
Sbjct: 250 VGASF 254
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 23.8 bits (49), Expect = 1.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 473 HVHEHHSPVGEYLHGHW 423
H E+ +P+G Y H W
Sbjct: 412 HYEENRAPLGLYFHAAW 428
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 415 WWHQCP*RYSPTGEWCS 465
WW + +Y P GE+ S
Sbjct: 96 WWQELQEKYDPKGEYKS 112
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 325 PGSHKRAGPTNSEGGDSSW 381
PG+ K+ GP + +SW
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 22.6 bits (46), Expect = 3.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 415 WWHQCP*RYSPTG 453
WW++ +Y PTG
Sbjct: 98 WWNELEAKYDPTG 110
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 22.6 bits (46), Expect = 3.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 92 PVGVQVSQGPFPEVHRNYLDPS 27
P G Q+ + P P V +Y+ P+
Sbjct: 400 PYGGQMFEAPIPNVSPHYVTPT 421
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 359 QKVVIALGDHLNAKCHAC 412
+K IAL D N CH C
Sbjct: 261 EKSWIALNDDYNRLCHLC 278
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 22.6 bits (46), Expect = 3.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 415 WWHQCP*RYSPTG 453
WW++ +Y PTG
Sbjct: 98 WWNELEAKYDPTG 110
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -3
Query: 113 EGFDNLIPVGVQVSQGPFPEVHRNYLDPSMAHFW 12
+G+ N I + +++ F +V R+Y DP ++W
Sbjct: 125 QGWQNSIRHNLSLNKC-FVKVPRHYDDPGKGNYW 157
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 72 GHLHTDWDQVVETFDDM 122
GHL+ D D+V++ +D+
Sbjct: 336 GHLNPDNDEVLQVLEDI 352
>AM292354-1|CAL23166.1| 321|Tribolium castaneum gustatory receptor
candidate 33 protein.
Length = 321
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -2
Query: 609 HQWIWSLENLWNNIFISFIKN 547
+ W E+ W+ +SFI+N
Sbjct: 120 YYWRQQYEDFWHRYTLSFIEN 140
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 21.8 bits (44), Expect = 5.8
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 457 WCSCTWWALQGRVYDMIIVVRFHANTIKLFVLDEADENVV 576
W + T+ L G Y ++ V FH + ++ ++ +NVV
Sbjct: 258 WITVTFILLVGDSYIVMYVFFFHLSDVRYVMVVYLLKNVV 297
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 21.4 bits (43), Expect = 7.7
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = +1
Query: 412 HWWHQCP*RYSPTGEW 459
+WW + ++ P GE+
Sbjct: 96 NWWQELESKFDPQGEY 111
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 21.4 bits (43), Expect = 7.7
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = +1
Query: 412 HWWHQCP*RYSPTGEW 459
+WW + ++ P GE+
Sbjct: 96 NWWQELEAKFDPKGEY 111
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 21.4 bits (43), Expect = 7.7
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = +1
Query: 412 HWWHQCP*RYSPTGEW 459
+WW + ++ P GE+
Sbjct: 96 NWWQELESKFDPQGEY 111
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 12 PKMGHRRIKVVTMDLREWTLGHLHTDWD 95
P R IK V L +W L DW+
Sbjct: 1493 PAARARFIKHVLQFLEKWNFDGLDLDWE 1520
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,485
Number of Sequences: 336
Number of extensions: 4325
Number of successful extensions: 29
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -