Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30029
(530 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 23 1.7
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 2.9
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 21 5.1
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 21 6.8
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.8
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 21 6.8
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 6.8
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 21 6.8
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 21 6.8
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 21 8.9
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 23.0 bits (47), Expect = 1.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 441 QSYCTKCSSLLKGASETFTNY 379
Q+ C+KCS K S T Y
Sbjct: 70 QTSCSKCSQRQKDGSRTIIRY 90
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 2.9
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +2
Query: 173 KIIFYKFNLSLNNIMVEGV 229
+++FY N S+N + EGV
Sbjct: 1613 EVVFYNANFSINYWISEGV 1631
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 21.4 bits (43), Expect = 5.1
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 441 QSYCTKCSSLLKGASETFTNY 379
Q+ C+KCS + S T Y
Sbjct: 70 QTSCSKCSQRQQDGSRTIIRY 90
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 217 GRGCSSSSQLTRIMSLTVRYIRN 285
GRG S + L V YIR+
Sbjct: 128 GRGASKKLSKVETLRLAVEYIRS 150
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 37 VPTPYKIELTFTLTRALKKLA 99
+PTPY L +TL K +A
Sbjct: 664 IPTPYGGRLVWTLPGKTKMIA 684
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 37 VPTPYKIELTFTLTRALKKLA 99
+PTPY L +TL K +A
Sbjct: 664 IPTPYGGRLVWTLPGKTKMIA 684
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 37 VPTPYKIELTFTLTRALKKLA 99
+PTPY L +TL K +A
Sbjct: 664 IPTPYGGRLVWTLPGKTKMIA 684
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 37 VPTPYKIELTFTLTRALKKLA 99
+PTPY L +TL K +A
Sbjct: 664 IPTPYGGRLVWTLPGKTKMIA 684
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 152 RVQTTRYKIIFYKFNLSLNNIMVEGVLPP 238
++ T+ KI F + M EG++PP
Sbjct: 291 QLNETQVKIWFQNRRMKQKKRMKEGLIPP 319
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 6.8
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +3
Query: 441 VKLMRLVNLNKRKGKFVVSNKFVY 512
++L ++VN K+K + +V ++VY
Sbjct: 1195 IQLKQVVNYKKKKFQRMVVARYVY 1218
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 152 RVQTTRYKIIFYKFNLSLNNIMVEGVLPP 238
++ T+ KI F + M EG++PP
Sbjct: 80 QLNETQVKIWFQNRRMKQKKRMKEGLIPP 108
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 21.0 bits (42), Expect = 6.8
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 152 RVQTTRYKIIFYKFNLSLNNIMVEGVLPP 238
++ T+ KI F + M EG++PP
Sbjct: 80 QLNETQVKIWFQNRRMKQKKRMKEGLIPP 108
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 20.6 bits (41), Expect = 8.9
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = +2
Query: 293 RLYPVFKRIFMTVFFNSVHFCACATIN 373
RLY +F V F S CA N
Sbjct: 31 RLYKIFVVFSFAVTFFSAWICALVNYN 57
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,549
Number of Sequences: 336
Number of extensions: 2732
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -