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Last updated: 2019/10/06
 
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30029
         (530 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   1.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.9  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   5.1  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   6.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   6.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   6.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.9  

>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 441 QSYCTKCSSLLKGASETFTNY 379
           Q+ C+KCS   K  S T   Y
Sbjct: 70  QTSCSKCSQRQKDGSRTIIRY 90


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 173  KIIFYKFNLSLNNIMVEGV 229
            +++FY  N S+N  + EGV
Sbjct: 1613 EVVFYNANFSINYWISEGV 1631


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 441 QSYCTKCSSLLKGASETFTNY 379
           Q+ C+KCS   +  S T   Y
Sbjct: 70  QTSCSKCSQRQQDGSRTIIRY 90


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +1

Query: 217 GRGCSSSSQLTRIMSLTVRYIRN 285
           GRG S        + L V YIR+
Sbjct: 128 GRGASKKLSKVETLRLAVEYIRS 150


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 37  VPTPYKIELTFTLTRALKKLA 99
           +PTPY   L +TL    K +A
Sbjct: 664 IPTPYGGRLVWTLPGKTKMIA 684


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 37  VPTPYKIELTFTLTRALKKLA 99
           +PTPY   L +TL    K +A
Sbjct: 664 IPTPYGGRLVWTLPGKTKMIA 684


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 37  VPTPYKIELTFTLTRALKKLA 99
           +PTPY   L +TL    K +A
Sbjct: 664 IPTPYGGRLVWTLPGKTKMIA 684


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 37  VPTPYKIELTFTLTRALKKLA 99
           +PTPY   L +TL    K +A
Sbjct: 664 IPTPYGGRLVWTLPGKTKMIA 684


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 152 RVQTTRYKIIFYKFNLSLNNIMVEGVLPP 238
           ++  T+ KI F    +     M EG++PP
Sbjct: 291 QLNETQVKIWFQNRRMKQKKRMKEGLIPP 319


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = +3

Query: 441  VKLMRLVNLNKRKGKFVVSNKFVY 512
            ++L ++VN  K+K + +V  ++VY
Sbjct: 1195 IQLKQVVNYKKKKFQRMVVARYVY 1218


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 152 RVQTTRYKIIFYKFNLSLNNIMVEGVLPP 238
           ++  T+ KI F    +     M EG++PP
Sbjct: 80  QLNETQVKIWFQNRRMKQKKRMKEGLIPP 108


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 152 RVQTTRYKIIFYKFNLSLNNIMVEGVLPP 238
           ++  T+ KI F    +     M EG++PP
Sbjct: 80  QLNETQVKIWFQNRRMKQKKRMKEGLIPP 108


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +2

Query: 293 RLYPVFKRIFMTVFFNSVHFCACATIN 373
           RLY +F      V F S   CA    N
Sbjct: 31  RLYKIFVVFSFAVTFFSAWICALVNYN 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,549
Number of Sequences: 336
Number of extensions: 2732
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

The construction of this database has been supported by
Grant-in-Aid for Publication of Scientific Research Results,
JSPS, Japan (1999-2003, 2005-2018).

The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project (NBRP),
Grants-in-Aid for Scientific Research, MEXT,and the Agrigenome Program, NIAS/MAFF.
The maintenance and distribution of the DNA clones are supported by the National Bioresource Project (NBRP).