Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30027
(765 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 44 1e-06
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 25 0.88
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 25 0.88
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.88
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.88
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.88
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.88
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 1.2
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 23 2.7
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 23 2.7
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 23 2.7
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 23 3.5
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 23 3.5
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 23 3.5
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 21 8.2
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 21 8.2
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 21 8.2
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 21 8.2
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 21 8.2
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 44.0 bits (99), Expect = 1e-06
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Frame = +1
Query: 1 GKTATFSISILQQI---------DTSIRECQALILAPTRELAQQIQKVVIALGDHLNAKC 153
GKTA F + I+ + + + + +I++PTRELA QI + K
Sbjct: 207 GKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFAYNSTVKV 266
Query: 154 HACIGGTNVREDIRQLESGVHVVVGTPGRVYDMI 255
GGT+ ++ G H++V TPGR+ D +
Sbjct: 267 AVIYGGTSTNHQRGRILGGCHILVATPGRLKDFV 300
Score = 43.2 bits (97), Expect = 2e-06
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +3
Query: 276 NTIKLFVLDEADEMLSRGFKDQIHDVFKILS----ADVQVILLSATMPDDVLEVSRCFMR 443
N++K FVLDEAD ML GF + ++ S + Q ++ SAT P++V +++ F+
Sbjct: 308 NSLKYFVLDEADRMLDMGFLGDVEEMLSHQSMPATGERQTLMFSATFPEEVQQLAGKFLL 367
Query: 444 DPVRILV 464
+ + I V
Sbjct: 368 NYIFIAV 374
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 24.6 bits (51), Expect = 0.88
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 226 PPPHEHHSP 200
PPPH HH P
Sbjct: 737 PPPHPHHQP 745
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 24.6 bits (51), Expect = 0.88
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 226 PPPHEHHSP 200
PPPH HH P
Sbjct: 629 PPPHPHHQP 637
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.88
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 24 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 128
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.88
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 24 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 128
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.88
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 24 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 128
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.88
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 24 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSS 128
ID + + + MS+ G H G EGGD S
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDES 1189
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -1
Query: 201 QLANIFTDIGATNASMAFSIQVITKSYHHLLNLLGQLSCGSQDQSLTF 58
Q+AN TD + S+A S +++ H L + + G+Q +F
Sbjct: 207 QMANYSTDYSSLTHSLAASNHLLSSGQHLLQDTYKSMLPGAQTVGASF 254
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 23.0 bits (47), Expect = 2.7
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 165 WWHQCP*RYSPTGEWCS 215
WW + +Y P GE+ S
Sbjct: 96 WWQELQEKYDPKGEYKS 112
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 23.0 bits (47), Expect = 2.7
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 75 PGSHKRAGPTNSEGGDSSW 131
PG+ K+ GP + +SW
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 23.0 bits (47), Expect = 2.7
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 75 PGSHKRAGPTNSEGGDSSW 131
PG+ K+ GP + +SW
Sbjct: 28 PGAKKKVGPIDQSAAAASW 46
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 22.6 bits (46), Expect = 3.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3
Query: 165 WWHQCP*RYSPTG 203
WW++ +Y PTG
Sbjct: 98 WWNELEAKYDPTG 110
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 109 QKVVIALGDHLNAKCHAC 162
+K IAL D N CH C
Sbjct: 261 EKSWIALNDDYNRLCHLC 278
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 22.6 bits (46), Expect = 3.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3
Query: 165 WWHQCP*RYSPTG 203
WW++ +Y PTG
Sbjct: 98 WWNELEAKYDPTG 110
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 21.4 bits (43), Expect = 8.2
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = +3
Query: 162 HWWHQCP*RYSPTGEW 209
+WW + ++ P GE+
Sbjct: 96 NWWQELESKFDPQGEY 111
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 21.4 bits (43), Expect = 8.2
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = +3
Query: 162 HWWHQCP*RYSPTGEW 209
+WW + ++ P GE+
Sbjct: 96 NWWQELEAKFDPKGEY 111
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 21.4 bits (43), Expect = 8.2
Identities = 5/16 (31%), Positives = 10/16 (62%)
Frame = +3
Query: 162 HWWHQCP*RYSPTGEW 209
+WW + ++ P GE+
Sbjct: 96 NWWQELESKFDPQGEY 111
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.4 bits (43), Expect = 8.2
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +3
Query: 636 CVTLLYLLC 662
C+TLLY++C
Sbjct: 322 CMTLLYIIC 330
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.4 bits (43), Expect = 8.2
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +3
Query: 636 CVTLLYLLC 662
C+TLLY++C
Sbjct: 322 CMTLLYIIC 330
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,123
Number of Sequences: 336
Number of extensions: 4614
Number of successful extensions: 23
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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