Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0237.Seq
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   5.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   5.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   5.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   5.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   7.6  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 73  NIMQMNNIPFSTSLTAPAENNMPVWELQQPNITGVQESPFR 195
           N++   ++PF          N+ V +L   NIT V +  FR
Sbjct: 204 NLVVAPSVPFEQDTGLGGLQNIKVLDLSFNNITSVAKQFFR 244


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 13/47 (27%), Positives = 17/47 (36%)
 Frame = +2

Query: 221 QHQCCQTSNIRPRTNAIPTSVAYSHTQRPEIFCPAHTMSSAITKLRI 361
           Q  C  T  +    NAI   V     Q+P +  P H    A   + I
Sbjct: 563 QQNCMCTHKVDIPLNAIVEIVLVDEVQQPNLSHPFHLHGYAFNVIGI 609


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = +1

Query: 223 TPMLPNFQHPPTNKCNTDLSCLFTYTTT*DLLSRSHYEFSHHQT 354
           T  +PN Q  P +  N      + YT + +        + HHQT
Sbjct: 26  TSDIPNAQQMPPHYSNYHYEDPYGYTGSEETPPSPQEVYYHHQT 69


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = +1

Query: 223 TPMLPNFQHPPTNKCNTDLSCLFTYTTT*DLLSRSHYEFSHHQT 354
           T  +PN Q  P +  N      + YT + +        + HHQT
Sbjct: 26  TSDIPNAQQMPPHYSNYHYEDPYGYTGSEETPPSPQEVYYHHQT 69


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/44 (27%), Positives = 18/44 (40%)
 Frame = +1

Query: 223 TPMLPNFQHPPTNKCNTDLSCLFTYTTT*DLLSRSHYEFSHHQT 354
           T  +PN Q  P +  N      + YT + +        + HHQT
Sbjct: 26  TSDIPNAQQMPPHYSNYHYEDPYGYTGSEETPPSPQEVYYHHQT 69


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 155 NSPISQEYKRVPSDFS*IRHP 217
           ++P+S   K+ PS F+   HP
Sbjct: 349 HNPMSHHLKQEPSGFTSSNHP 369


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 102 LNKFDCTCREQYAG 143
           +N F C C+E + G
Sbjct: 87  INAFQCICKEGWEG 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,997
Number of Sequences: 336
Number of extensions: 2852
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)