Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0218.Seq
         (847 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.0  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   5.3  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   7.0  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +3

Query: 315 YNFRLIMAGNFVKLIYRNYNLALKLGPTLDPANEXLAYGDGKEKN 449
           Y   L      V L +  YNL+L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +3

Query: 315 YNFRLIMAGNFVKLIYRNYNLALKLGPTLDPANEXLAYGDGKEKN 449
           Y   L      V L +  YNL+L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 627 NCSPGGVGRCWCPNI 583
           +C PG  G+C+ P+I
Sbjct: 47  SCGPGQSGQCFGPSI 61


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 458 HQLEVHYLVGEQQSVLQIHNTKYNP 532
           H+LE  +    +  +  +H +K+NP
Sbjct: 97  HELETKFNPHHEIKLQHLHQSKFNP 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,805
Number of Sequences: 336
Number of extensions: 3042
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)