Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0217.Seq
         (797 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    25   0.70 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.70 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.5  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = -2

Query: 670 SCRRDCPYRRIAITHFILIVYSCYAPTCHCLHPFVSAQQWVH 545
           +CR   P  RI   HF L +Y+     C    P  +   W H
Sbjct: 111 ACREGEP-PRICYYHFTLELYTVLGAACQVCTPNATNTVWSH 151


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = -2

Query: 670 SCRRDCPYRRIAITHFILIVYSCYAPTCHCLHPFVSAQQWVH 545
           +CR   P  RI   HF L +Y+     C    P  +   W H
Sbjct: 111 ACREGEP-PRICYYHFTLELYTVLGAACQVCTPNATNTVWSH 151


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 431 SRRGIFEKLQQLAFPLSHRLPMF 499
           S   + EKLQ  A  L+HR P F
Sbjct: 609 SNPSLEEKLQIFALQLTHRAPTF 631


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 587 SLLTPIRLSSAMGSYTCQPSSGKL 516
           SLL  +R SS  G  TC+    K+
Sbjct: 621 SLLDKMRDSSGAGRITCEKCGNKI 644


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,793
Number of Sequences: 336
Number of extensions: 4296
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)