Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0156
         (319 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   2.4  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    20   5.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    20   5.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    20   5.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           20   5.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   7.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   7.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    19   9.5  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 244 PKPYNISGNISTSRSVQS 297
           P P +I+ N STS S  S
Sbjct: 156 PTPVSINNNTSTSSSASS 173


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 249 FWSLNGYPNFLLNSFWAKLC 190
           +W+ + Y N+  N F A  C
Sbjct: 10  YWTNSFYQNYKTNPFLASDC 29


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 242 DQNHITSPEIYQPVGPYSPAI 304
           DQ H+  P++    G YS ++
Sbjct: 113 DQQHLYHPQVLLSPGGYSGSL 133


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 249 FWSLNGYPNFLLNSFWAKLC 190
           +W+ + Y N+  N F A  C
Sbjct: 10  YWTNSFYQNYKTNPFLASDC 29


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 249 FWSLNGYPNFLLNSFWAKLC 190
           +W+ + Y N+  N F A  C
Sbjct: 10  YWTNSFYQNYKTNPFLASDC 29


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 107 IFLSFELLTYLH 142
           +F+SF  + YLH
Sbjct: 219 VFISFSKICYLH 230


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 7.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 107 IFLSFELLTYLH 142
           +F+SF  + YLH
Sbjct: 237 VFISFSKICYLH 248


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 263 PEIYQPVGPYSP 298
           P IY+P   YSP
Sbjct: 34  PPIYEPSCQYSP 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,285
Number of Sequences: 336
Number of extensions: 1670
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)