Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0092
         (593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.052
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.64 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    24   0.84 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.5  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   7.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.052
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 93  VFKLFCLCFYHFFVCFNLF 37
           V  LF LC YHFF  F +F
Sbjct: 158 VHLLFLLCIYHFFCAFIIF 176



 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 81  FCLCFYHFFVCFNLF 37
           F LC Y+F+  F +F
Sbjct: 142 FLLCIYYFYCAFIIF 156



 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 84  LFCLCFYHFFVCFNLF 37
           +  LC Y+F+  F LF
Sbjct: 233 IILLCIYYFYYAFILF 248



 Score = 21.4 bits (43), Expect = 5.9
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -3

Query: 93  VFKLFCLCFYHFFVCFNLFKFCTKNFMSFF 4
           V  LF LC Y+F V    F  C   F   F
Sbjct: 125 VHLLFLLCIYYFVVPL-FFLLCIYYFYCAF 153


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 422 ILSG*VEMLTVFLCHRKGYKGTSIRVQIQRPLWQLKVSLM 303
           I +G    +  F+C    Y    +RVQ Q+ L  +++S M
Sbjct: 323 INAGLAIFILYFICDEAHYASNCLRVQFQKKLLLVELSWM 362


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -2

Query: 271 ELWAQLCRPGLCPGFRRCSIARN 203
           E+W +  R  LCP   R SI RN
Sbjct: 718 EVWERKRRQYLCPVLLRVSILRN 740


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +3

Query: 180  RVCRWSAXFLAMEHLRKPGQSPGLHSWAHNSK 275
            ++C W       E  +KPG  P   SW   +K
Sbjct: 1142 KICDWPKSAKCEE--KKPGHKPSTSSWQKPTK 1171


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -1

Query: 227 PKMLHREEPGRPAADST*HRYGGPRKCSSLSS 132
           P  +    PG+PA  +T      P   +S +S
Sbjct: 146 PLSVSTSPPGKPATSTTSQNLSSPASSTSSTS 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,217
Number of Sequences: 336
Number of extensions: 3220
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)