BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0250.Seq (460 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 20 9.6 AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 20 9.6 >DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc growth factor 2 protein. Length = 439 Score = 20.2 bits (40), Expect = 9.6 Identities = 10/31 (32%), Positives = 15/31 (48%) Frame = +1 Query: 316 MSGLGIVCRRLPFLAGCCAR*SSVVLRSVET 408 + G+ IV L G C R +LR+ +T Sbjct: 407 LGGIAIVDLSLDDFKGTCGRDKYDILRTAKT 437 >AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor candidate 60 protein. Length = 364 Score = 20.2 bits (40), Expect = 9.6 Identities = 7/19 (36%), Positives = 12/19 (63%) Frame = +3 Query: 234 IWIAEIDLSVFFLTRASRL 290 + + +DL VFF T ++L Sbjct: 111 VMVVTVDLHVFFFTLFNKL 129 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 98,296 Number of Sequences: 336 Number of extensions: 1845 Number of successful extensions: 2 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2 length of database: 122,585 effective HSP length: 52 effective length of database: 105,113 effective search space used: 10511300 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
- SilkBase 1999-2023 -