Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0241.Seq
         (534 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    25   0.55 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.3  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    23   2.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   3.0  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.0  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   3.9  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   3.9  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   5.2  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 0.55
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 209 DKYHXPLNKIICEETIRLGGSMVHHHGIGKHRVXWSKLE 93
           D  H   +K  C ET + G   +  H I   R  W++LE
Sbjct: 69  DALHTECSK--CSETQKNGSKKIMRHLIDHKRDWWNELE 105


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 46  SNCFFSPSSNAHALPCSSLLQXTRC 120
           + C  +P SNA  L C  L+    C
Sbjct: 300 NECLSNPCSNAGTLDCVQLVNDYHC 324


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 68  EGLKKQFDPNGIMNTGY 18
           E L+K+FDP GI    Y
Sbjct: 97  EQLQKKFDPQGIYKKRY 113


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +2

Query: 14  DSSPYS*CH*DRTAFSALPATPTRCRVPVCSSXRDVYRYRG 136
           D S  + C  +     AL   PT+C +P C    D  R  G
Sbjct: 136 DESDENSCTVETDPNRALDCDPTQCVLPDCFCSADGTRIPG 176


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -2

Query: 74  LLEGLKKQFDPNGIMNTGYYLSA 6
           L++ ++K+FD NG++ T    +A
Sbjct: 160 LIKEMRKEFDKNGLILTAAVAAA 182


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
 Frame = -2

Query: 176 CEETIRLGGSMVHHHGIGKHRVXWSKLE--HGSAWALLEGLKKQFDPNGI 33
           C E ++     V HH I      W +LE  +  +       K + + NGI
Sbjct: 73  CNEKVKANVRKVLHHLIDNKPDMWKQLEAKYDPSGEYRSKYKDELEKNGI 122


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 209 DKYHXPLNKIICEETIRLGGSMVHHHGIGKHRVXWSKLE 93
           D  H   +K  C E  + G   + H+ I   R  W++LE
Sbjct: 69  DALHSGCSK--CTEKQKEGSRKIIHYLIDNKRDWWNELE 105


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 74  LLEGLKKQFDPNGIMNT 24
           LL+GLK  F P G + T
Sbjct: 156 LLQGLKDAFAPKGYLLT 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,451
Number of Sequences: 336
Number of extensions: 2049
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)