Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0236.Seq
         (900 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    26   0.46 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   1.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   5.7  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   5.7  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.7  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   7.5  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   7.5  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   7.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   7.5  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   9.9  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 335 CAVGSPTCWTRAMRTCCSK 391
           C  G PTCW    +  C K
Sbjct: 878 CENGKPTCWRECDKATCEK 896


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 598 PLSPAGVIAKRPAPIALPNSCA 663
           P  P GV  KR  P AL  +CA
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCA 73


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 135 LITSSRVTNEVCSEANSTK 79
           L   +++  ++C EANSTK
Sbjct: 303 LFILAKIVTDLCQEANSTK 321


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -3

Query: 196  CTFQPGN--DYVLNGVDTSIRDLNNLVES 116
            CT++  N  +  L  +  S+RDLN  +ES
Sbjct: 1090 CTYKADNKENEQLRKIQESLRDLNRKIES 1118


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -3

Query: 196  CTFQPGN--DYVLNGVDTSIRDLNNLVES 116
            CT++  N  +  L  +  S+RDLN  +ES
Sbjct: 1090 CTYKADNKENEQLRKIQESLRDLNRKIES 1118


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 838 SCSKLETXIXPYLGLIFGFIRDF 770
           +C++LE  +  +LG + G   DF
Sbjct: 110 ACTELEVVMLDWLGKMIGLPEDF 132


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 604 SPAGVIAKRPAPIALPNSCA 663
           +P G   KR  P AL N CA
Sbjct: 54  TPEGEELKRDIPEALQNECA 73


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 156 LTRLFVILITSSRVTNEVCSEANSTK 79
           +T +F +   S R + ++C+EAN TK
Sbjct: 200 VTYVFDLFYLSKRAS-DLCNEANKTK 224


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 478 GGPVPNSPYSGRITIHWPSFYNVV 549
           G P+P   Y+   T  W S +N V
Sbjct: 246 GDPIPYIQYTETETKTWGSVFNTV 269


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 604 SPAGVIAKRPAPIALPNSCA 663
           +P+G   K+  P AL N CA
Sbjct: 52  TPSGEELKKDIPDALKNECA 71


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 891 GFFAPFNFGXQGSFNKGTLVPNWK 820
           G + PF  G +    K  +VPN K
Sbjct: 412 GTYMPFGVGPRNCIAKFDIVPNGK 435


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +2

Query: 314 SWLPATTCAVGSPTCWTRAMRTCCSKSRRSTPY 412
           S LP    +  +PT  +R++ T CS    +  Y
Sbjct: 82  SSLPTQRTSTSNPTYSSRSVMTSCSSVPTTASY 114


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 336 ARWGHQLAGRGR*GLAVLSPDVALH 410
           A WG Q  G G+     ++PD+  H
Sbjct: 30  ASWGAQRPGNGQFVPEDINPDLCTH 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,279
Number of Sequences: 336
Number of extensions: 3600
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)