Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0235.Seq
         (823 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   132   3e-33
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    29   0.059
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    29   0.059
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   1.7  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   5.1  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    22   5.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.1  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   6.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  132 bits (319), Expect = 3e-33
 Identities = 64/88 (72%), Positives = 75/88 (85%), Gaps = 1/88 (1%)
 Frame = -2

Query: 270 NIKAETEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPI 91
           N++ + EADKNDKAVKDLVILL+ETALLSSGFTLDEPQVHASRIYRMIKLGLGIDE+E +
Sbjct: 634 NLRQKAEADKNDKAVKDLVILLFETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEEEAM 693

Query: 90  QVEEPASGDVPPLE-GDADDASRMEEVD 10
             E+   GD P  +  +++DASRMEEVD
Sbjct: 694 ITEDAQGGDAPSADAAESEDASRMEEVD 721



 Score = 30.3 bits (65), Expect = 0.019
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = -3

Query: 302 LEINPDHSIVETLRQKRKPTRMTKLLRILL 213
           LEINPD SI++ LRQK +  +  K ++ L+
Sbjct: 623 LEINPDPSILKNLRQKAEADKNDKAVKDLV 652


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 28.7 bits (61), Expect = 0.059
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 733 VVXHRXDRRFSP-FDVGVPRSLIVDSCSKLEQHSTLSR 623
           +V +  DRR  P FD  +P   +VDSCS ++     +R
Sbjct: 358 IVMNELDRRDDPTFDESLPGCHMVDSCSNIQTGEQFAR 395


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 28.7 bits (61), Expect = 0.059
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -1

Query: 733 VVXHRXDRRFSP-FDVGVPRSLIVDSCSKLEQHSTLSR 623
           +V +  DRR  P FD  +P   +VDSCS ++     +R
Sbjct: 365 IVMNELDRRDDPTFDESLPGCHMVDSCSNIQTGEQFAR 402


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 427 PLSPAGVIAKRPAPIALPNSCA 492
           P  P GV  KR  P AL  +CA
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCA 73


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 433 SPAGVIAKRPAPIALPNSCA 492
           +P G   KR  P AL N CA
Sbjct: 54  TPEGEELKRDIPEALQNECA 73


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +1

Query: 427 PLSPAGVIAKRPAPIALPNSCAXEWRMEIVSVNILLKF 540
           P  P G   K  AP+ L  SC      E+  +  +L F
Sbjct: 57  PCDPVGRRLKSLAPLVLRGSCPQCTPQEMKQIQKVLAF 94


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -3

Query: 128 SNWVLVLMKMSRFRLKSLLLEMCRH 54
           SNW +    + R+  + L +++C H
Sbjct: 29  SNWAIYRPGIGRYAQEDLPVDLCTH 53


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 433 SPAGVIAKRPAPIALPNSCA 492
           +P+G   K+  P AL N CA
Sbjct: 52  TPSGEELKKDIPDALKNECA 71


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -3

Query: 128 SNWVLVLMKMSRFRLKSLLLEMCRH 54
           +NW    +K+ +F  + ++ ++C H
Sbjct: 94  TNWSQYRVKIGKFTPEHIIPDLCTH 118


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,022
Number of Sequences: 336
Number of extensions: 4079
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)