Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0214.Seq
         (886 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   1.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   3.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   3.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   3.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   3.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   5.6  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.4  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 287 GHYFLEPGTMPWKSSL 334
           GH++L+ G  PWK S+
Sbjct: 461 GHWYLDCGFGPWKPSM 476


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +2

Query: 110 LFXIMSXIVENKVDELPDLDNLLQCPVC 193
           L  +M  I++NKV+++   + L++ P C
Sbjct: 560 LCKVMKSILDNKVEKVVVSNRLVESPCC 587


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 641 TFKAWADLHQLLGKFSXWQSKIFKHGHN 724
           TF  + DLH L G+F+    K  +  +N
Sbjct: 418 TFMNYTDLHDLWGEFTLKALKRLERANN 445


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 200 FHNILDTEVSYPSLAIRQPYFQL 132
           F NI + +V++ SLA+  PY  L
Sbjct: 118 FKNIEEVDVAFRSLAVWVPYKHL 140


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/49 (24%), Positives = 18/49 (36%)
 Frame = +3

Query: 669 NSWGNLVTGNQKFSNMGIIFSXPLKYFSDKIWXALXXRWAGIHLG*ANW 815
           NS  NL T      N        + +   K W  L  +W+ + +   NW
Sbjct: 254 NSGYNLTTFGSFIFNANSAIEGIIFFNLAKSWPQLIEKWSRVEMALDNW 302


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 200 FHNILDTEVSYPSLAIRQPYFQL 132
           F NI + +V++ SLA+  PY  L
Sbjct: 118 FKNIEEVDVAFRSLAVWVPYKHL 140


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
 Frame = +2

Query: 389 Y*LQIVVVHQQETVDLTMQNIWVKMKITIIKIQ*WPLTHVRTFSLPLAAR--MGIPSDFQ 562
           Y L + ++H+Q+T D+ + +         +  + +         +P  +R  + IP D+ 
Sbjct: 125 YALSVAILHRQDTQDIDLPSFIESFPDKYVDSKVFAKAREEATVVPEGSRTPIEIPRDYT 184

Query: 563 AARLLNHLR*LSFFQ 607
           A+ L    R L++F+
Sbjct: 185 ASDLEEEHR-LAYFR 198


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +2

Query: 158 PDLDNLLQCPVCYEIP 205
           P+ D ++  P+C +IP
Sbjct: 317 PNFDKMIGNPICVQIP 332


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -2

Query: 813  NWPTQGECQP---IVXPKXPK 760
            NWPTQG   P   +V P+  K
Sbjct: 1078 NWPTQGTTIPPPAVVMPEVDK 1098


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,733
Number of Sequences: 336
Number of extensions: 4040
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)