Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0084.Seq
         (822 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    25   0.96 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    25   0.96 
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   2.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.2  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    23   2.9  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.9  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   6.8  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   8.9  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   8.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.9  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 392 RQATVCVWARQCQQC 348
           R+A VC+WA Q  +C
Sbjct: 132 REARVCMWADQVPEC 146


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 392 RQATVCVWARQCQQC 348
           R+A VC+WA Q  +C
Sbjct: 132 REARVCMWADQVPEC 146


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 324 HLLSHQHNRLHQLHICF*SHYRHEFAHPDFILLRKSGHKEVRL 196
           HL+ H+ N  H+L   F  H  HE         + + H+EV+L
Sbjct: 87  HLMIHRPNWWHELETKFNPH--HEIKLQHLHQSKFNPHEEVKL 127


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 582 LVFHSTXFAYNITCLC 535
           L+F ST +  N+ C+C
Sbjct: 911 LIFVSTLYTANVVCIC 926


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
          protein.
          Length = 46

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 83 TSSPPCKTTICP 48
          T + PCK TICP
Sbjct: 3  THTLPCKCTICP 14


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 563 QVEWNTNASLYFWIIVTVLGGCRHVSYTXHMRIXAQ 670
           Q E N   + YF +++++      V YT ++RI A+
Sbjct: 124 QKERNLFKNAYFQLVLSISVYSSSVGYTQYVRIAAK 159


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 571 MEYQCESIFLDHCYRVGRVPTCFV 642
           M  +C+   L  C  VG  P C V
Sbjct: 236 MRRKCQECRLKKCLSVGMRPECVV 259


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 670 LCPDPHMXSVRNMSAPAQHGNNDPEI*TRIGIP 572
           L P P +      S  A  GN  P+I T++  P
Sbjct: 85  LMPSPTVSGSEMSSPGAGSGNLSPQIQTQVARP 117


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 670 LCPDPHMXSVRNMSAPAQHGNNDPEI*TRIGIP 572
           L P P +      S  A  GN  P+I T++  P
Sbjct: 85  LMPSPTVSGSEMSSPGAGSGNLSPQIQTQVARP 117


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 573 GIPMRVYISGSLLPCWAGAD-MFRTL 647
           G P+   ISG++LP +  A+ +F+ L
Sbjct: 41  GPPVNDIISGNILPLYTSAENIFKQL 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,562
Number of Sequences: 336
Number of extensions: 4878
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)