Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0132
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   1.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   1.0  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   2.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   3.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.6  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +3

Query: 225 RHENDFSNLF*LNKVLYNDSIIYCFIKCYIIACPN*SE 338
           ++ N + N+  ++K+L ND ++  +IKC +   P  SE
Sbjct: 22  KYTNKYDNVD-VDKILNNDRVLTNYIKCLMDEGPCTSE 58


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 459 LHNSRSPNYVMSHKKN*SFFILN 391
           L +S  PNY++   KN ++ +LN
Sbjct: 11  LDSSTQPNYLILSNKNNTYLVLN 33


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 685 NHMILPFNSIMCTEVKNTLHNYVNS 611
           N+   PF +  C + +NT HNY ++
Sbjct: 18  NYKTNPFLASDCDKNQNTEHNYTHN 42


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -3

Query: 700 HNQLPNHMILPFNSIM-CTEVKNTLHNYVN 614
           HN  P+H I P +++M    ++N   + +N
Sbjct: 344 HNPYPSHSIYPSSNLMPLNNIQNLSQSGIN 373


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 59  FFKGAFSNVLRGTGGAFVLVLYDEI 133
           F    ++  L  TGG  V+ L DEI
Sbjct: 507 FRPNTYNRFLAATGGDHVISLIDEI 531


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,374
Number of Sequences: 336
Number of extensions: 3196
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)