Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0124
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.2  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   5.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.3  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   9.7  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 257 TRIIILPINVLFYLLFCF 310
           T ++I   N LFYL FCF
Sbjct: 312 TLVVIYTFN-LFYLCFCF 328


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 257 TRIIILPINVLFYLLFCF 310
           T ++I   N LFYL FCF
Sbjct: 268 TLVVIYTFN-LFYLCFCF 284


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +2

Query: 398 RNYLLFNFIILYFDVVTLL 454
           R+YL+F F+ ++F V+ L+
Sbjct: 94  RHYLIFIFVNVFFWVIILM 112


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +1

Query: 130 YCKPQSLRTMVHGVXRD-QNYTL 195
           +CK Q LRT+  GV R+ +N+ +
Sbjct: 558 FCKMQPLRTLKIGVYRNIKNFNI 580


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 251 KSTRIIILPINVLFYLLFCFC 313
           K+T IIIL +NV++ +    C
Sbjct: 350 KTTNIIILGLNVVYVVTAWIC 370


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 251 KSTRIIILPINVLFYLLFCFC 313
           K+T IIIL +NV++ +    C
Sbjct: 75  KTTNIIILGLNVVYVVTAWIC 95


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 273 CQLTFYSTYYFVSALPRLFLSYQI 344
           C+   +ST YFV  +  L LS ++
Sbjct: 85  CRSECFSTKYFVGCVESLLLSEEM 108


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 688  CLWN*WNILPCSPDL 644
            CLW  + +  C+P L
Sbjct: 1297 CLWGKYEVFNCAPGL 1311


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 263 IIILPINVLFYLLFCFCI 316
           +++  INVL+ L  C+ +
Sbjct: 102 LLLFVINVLYVLTLCYAV 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,664
Number of Sequences: 336
Number of extensions: 2759
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)