Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0104
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   3.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   5.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.8  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 616 CFPLAYSSIVNHFLAHAPLTH 554
           C PL+ SS     L H P++H
Sbjct: 334 CHPLSLSSDHQAMLHHNPMSH 354


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +3

Query: 513 VDLRRYGWXA*KTICVRGA*AKKWFTIEEYARGKHVAPTP 632
           + +RRYGW A     ++    +   T+   A  KH+   P
Sbjct: 588 ITMRRYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINP 627


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +2

Query: 122 LSLGFIKLRKNYKSGQVK*AQIQMMIGLIKQL*NIKNKLD 241
           +++ FIKL   +        +I++++G +    N + KLD
Sbjct: 407 VNIAFIKLATEWPQLMKAWLKIELLVGNLGMRRNFRKKLD 446


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 488 ECART*RRGRPKKI 529
           ECAR  R G P +I
Sbjct: 107 ECARACREGEPPRI 120


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 488 ECART*RRGRPKKI 529
           ECAR  R G P +I
Sbjct: 107 ECARACREGEPPRI 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,114
Number of Sequences: 336
Number of extensions: 3308
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)