Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0049
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   3.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   5.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.5  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 122 DEKNEVIQNLIESTPYSKIDNMKFYKVKFFEVLDL 226
           +E NEV+ ++ +   Y  +  MK+ +    EVL L
Sbjct: 340 EEMNEVLGDIKKKPTYQDLQEMKYLERCVKEVLRL 374


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 122 DEKNEVIQNLIESTPYSKIDNMKFYKVKFFEVLDL 226
           +E NEV+ ++ +   Y  +  MK+ +    EVL L
Sbjct: 340 EEMNEVLGDIKKKPTYQDLQEMKYLERCVKEVLRL 374


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +2

Query: 116 SEDEKNEVIQNLIESTPYS 172
           ++   N ++ NL++  PYS
Sbjct: 404 TDSSDNRILNNLLDKKPYS 422


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = +2

Query: 116 SEDEKNEVIQNLIESTPYS 172
           ++   N ++ NL++  PYS
Sbjct: 296 TDSSDNRILNNLLDKKPYS 314


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 477 NQVISSVYEATHEQLRIAHH 536
           +Q  +  Y+ THE + + HH
Sbjct: 100 HQNYNEPYQRTHENMLLRHH 119


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 477 NQVISSVYEATHEQLRIAHH 536
           +Q  +  Y+ THE + + HH
Sbjct: 100 HQNYNEPYQRTHENMLLRHH 119


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 477 NQVISSVYEATHEQLRIAHH 536
           +Q  +  Y+ THE + + HH
Sbjct: 100 HQNYNEPYQRTHENMLLRHH 119


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +2

Query: 59  RGERLEVFFKLNNLCYTTISEDEKNEVIQNLIEST 163
           R  +L+V   +      +  ++EKN   +NL+E+T
Sbjct: 95  RFPKLKVLLSVGGNADVSGQDEEKNIKYRNLLETT 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,906
Number of Sequences: 336
Number of extensions: 3664
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)