Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0046
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 589 NLLFLFNSEYFHIYLPFKPSL 651
           +LLFL   +YF ++L F P +
Sbjct: 192 HLLFLLCLDYFTLHLLFLPCI 212



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -2

Query: 555 ILFVCFKFIYTKV*VFIYRLRHYQICWVS*LLKYYSLRFFL 433
           +LF C   I+T   +F+  + ++    +  L  YY  R F+
Sbjct: 266 LLFCCAFIIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFI 306


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 199 NLSLLTIVFGATGKTKATWSNNLSKIV*QSVRMF 300
           N   LTI+    G TKA   +NL  I     + F
Sbjct: 78  NDGTLTIIDTGIGMTKADLVHNLGTIAKSGTKAF 111


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 10  GNHSPSGGPYARLS 51
           GN+ P GGP + +S
Sbjct: 532 GNNQPPGGPSSHVS 545


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,256
Number of Sequences: 336
Number of extensions: 3171
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)