Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0134.Seq
         (532 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.8  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   6.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.8  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   8.9  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = -2

Query: 159 GVFNFKLSFRFSLYLIFASNKQKKFFGHDV*ITTLRSL 46
           G  N  L       L+F   K  K +GH + +T L  L
Sbjct: 207 GTENLDLVLPIYSQLVFMCKKINKLYGHQLLLTILTYL 244


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 337 LPPNCSERF*KTMLRCNSSPRN 272
           LP NC +R     L  ++ PRN
Sbjct: 429 LPENCQKRHPFAYLPFSAGPRN 450


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 79  TRCINNYPSFAS 44
           T C NNYP +++
Sbjct: 250 TNCYNNYPYYSN 261


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 337 LPPNCSERF*KTMLRCNSSPRN 272
           LP NC +R     L  ++ PRN
Sbjct: 429 LPENCQKRHPFAYLPFSAGPRN 450


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 463 RCPPTRSGACRWLP 504
           RCPP    +C++ P
Sbjct: 32  RCPPIYEPSCQYSP 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,882
Number of Sequences: 336
Number of extensions: 2170
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)