Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0129.Seq
(695 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.59
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.59
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.59
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.59
AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory recept... 23 2.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 3.2
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 3.2
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 23 3.2
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 22 4.2
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 22 5.5
AY563109-1|AAS99587.1| 46|Tribolium castaneum aristaless protein. 22 5.5
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 7.3
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 21 7.3
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 21 7.3
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 21 7.3
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 21 7.3
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 21 9.6
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.59
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +1
Query: 337 HCWSWCMWLT*NSDQNW--LLGWTRKLKR 417
H W W +WL Q W L WT K +R
Sbjct: 463 HAWIWLLWLL---SQTWITLHIWTPKCER 488
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.59
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +1
Query: 337 HCWSWCMWLT*NSDQNW--LLGWTRKLKR 417
H W W +WL Q W L WT K +R
Sbjct: 463 HAWIWLLWLL---SQTWITLHIWTPKCER 488
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.59
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +1
Query: 337 HCWSWCMWLT*NSDQNW--LLGWTRKLKR 417
H W W +WL Q W L WT K +R
Sbjct: 463 HAWIWLLWLL---SQTWITLHIWTPKCER 488
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 25.0 bits (52), Expect = 0.59
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +1
Query: 337 HCWSWCMWLT*NSDQNW--LLGWTRKLKR 417
H W W +WL Q W L WT K +R
Sbjct: 463 HAWIWLLWLL---SQTWITLHIWTPKCER 488
>AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory receptor
candidate 42 protein.
Length = 347
Score = 23.0 bits (47), Expect = 2.4
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 162 RAKVFWSCVATSEAEPRATSAVH 94
RAK++ CV T+ P A S ++
Sbjct: 27 RAKIYALCVVTALVTPSALSIIY 49
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -1
Query: 431 PFVLGRFNFLVQPSSQFWSEFHVSHIH 351
P + G ++L + FW+E ++H
Sbjct: 1179 PLIRGEVHYLNRNEETFWNELIEQYLH 1205
Score = 21.4 bits (43), Expect = 7.3
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = +1
Query: 337 HCWSWCMWL 363
H W W +WL
Sbjct: 450 HAWIWLVWL 458
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -1
Query: 431 PFVLGRFNFLVQPSSQFWSEFHVSHIH 351
P + G ++L + FW+E ++H
Sbjct: 1179 PLIRGEVHYLNRNEETFWNELIEQYLH 1205
Score = 21.4 bits (43), Expect = 7.3
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = +1
Query: 337 HCWSWCMWL 363
H W W +WL
Sbjct: 450 HAWIWLVWL 458
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 22.6 bits (46), Expect = 3.2
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +3
Query: 237 NWCDGSYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVYVAHVKFGPKLAAWLDKEVEA 416
+WC S L+T + Y + YYS + L ++H +FG L K +
Sbjct: 234 SWCSSSQPV---LSTTNSTTNCY-NNYPYYSNMDYLSSSTMSHSQFGNGLETSWGKSRDE 289
Query: 417 TENEWNEG 440
+ +N G
Sbjct: 290 SSWFYNSG 297
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 22.2 bits (45), Expect = 4.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 608 RRLDYQLEKSNVERRLAQKHMVD 676
RRL+ LEKS + +H VD
Sbjct: 148 RRLEMSLEKSGLFSSKTSEHSVD 170
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 464 GGRNRGREDGAVARAGQELLIQAKKENV 547
GGR+ R DG +E I + ENV
Sbjct: 97 GGRDGDRGDGGGEEKKREFYIPPEVENV 124
>AY563109-1|AAS99587.1| 46|Tribolium castaneum aristaless protein.
Length = 46
Score = 21.8 bits (44), Expect = 5.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 255 RTRHTSFRVEELEPFF 208
RT TS+++EELE F
Sbjct: 1 RTTFTSYQLEELEKAF 16
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 7.3
Identities = 5/9 (55%), Positives = 6/9 (66%)
Frame = +1
Query: 337 HCWSWCMWL 363
H W W +WL
Sbjct: 217 HAWIWLVWL 225
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 21.4 bits (43), Expect = 7.3
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 191 DLALFLKNGSNSSTRKLV*RVLHFWCGSGNIPVQQGNLCNGARIL 325
D+ L L + + +T+ + LH W G+G + + N +IL
Sbjct: 87 DVELVLTD-TKQNTKSFIYHFLHSWLGTGLLTSRGPKWQNRRKIL 130
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/35 (22%), Positives = 19/35 (54%)
Frame = +2
Query: 590 AYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNV 694
+YS + +DY + + V + + +H W+ ++V
Sbjct: 198 SYSHIFSLMDYNIVMALVLQFITLQHTFIWVFNDV 232
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/35 (22%), Positives = 19/35 (54%)
Frame = +2
Query: 590 AYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNV 694
+YS + +DY + + V + + +H W+ ++V
Sbjct: 198 SYSHIFSLMDYNIVMALVLQFITLQHTFIWVFNDV 232
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/35 (22%), Positives = 19/35 (54%)
Frame = +2
Query: 590 AYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNV 694
+YS + +DY + + V + + +H W+ ++V
Sbjct: 198 SYSHIFSLMDYNIVMALVLQFITLQHTFIWVFNDV 232
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 532 QEGERAPAARGRLQGEA 582
+E ERAPA R G+A
Sbjct: 271 EEAERAPAPAVRAAGDA 287
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,372
Number of Sequences: 336
Number of extensions: 3549
Number of successful extensions: 24
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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