Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0099.Seq
         (715 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.5  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
 Frame = +3

Query: 132 SSNFAEPADGVLL----QSPSTKLLINDQELGTATLYITENNVIW 254
           S+  AE    VL+     S STK+L  D +   +   I    V+W
Sbjct: 187 STALAESFQNVLVPTASNSKSTKVLFKDVDRNCSAYIIAHYRVLW 231



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 245 VVFSDVQRSCA*FLIIY 195
           V+F DV R+C+ ++I +
Sbjct: 210 VLFKDVDRNCSAYIIAH 226


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
 Frame = +3

Query: 132 SSNFAEPADGVLL----QSPSTKLLINDQELGTATLYITENNVIW 254
           S+  AE    VL+     S STK+L  D +   +   I    V+W
Sbjct: 187 STALAESFQNVLVPTASNSKSTKVLFKDVDRNCSAYIIAHYRVLW 231



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 245 VVFSDVQRSCA*FLIIY 195
           V+F DV R+C+ ++I +
Sbjct: 210 VLFKDVDRNCSAYIIAH 226


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
 Frame = +3

Query: 132 SSNFAEPADGVLL----QSPSTKLLINDQELGTATLYITENNVIW 254
           S+  AE    VL+     S STK+L  D +   +   I    V+W
Sbjct: 187 STALAESFQNVLVPTASNSKSTKVLFKDVDRNCSAYIIAHYRVLW 231



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 245 VVFSDVQRSCA*FLIIY 195
           V+F DV R+C+ ++I +
Sbjct: 210 VLFKDVDRNCSAYIIAH 226


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 14  LFFLITNKPRDWKSFIKN 67
           L+F I  +  DWK  +KN
Sbjct: 79  LYFDIDKQTCDWKDSVKN 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,986
Number of Sequences: 336
Number of extensions: 2923
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)