Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0098.Seq
         (426 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.31 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   0.93 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   2.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   2.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   5.0  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   6.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    20   8.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.31
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +2

Query: 230 FYSICKDALGQAWVAGGGEVAAPGLDAYH 316
           +Y IC     Q W+       A G  AYH
Sbjct: 906 YYEICNRIRNQRWIVNRDTSGATGPFAYH 934



 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 221 FEMFYSICKDALGQAWVAGGGEVAAP 298
           F  ++ IC   L + W  G  E  +P
Sbjct: 453 FLAYFEICDMLLNEGWHKGMDESGSP 478


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = -2

Query: 317 SGTRPARVPRPHHPQLPK-PDPERPYILNKTFRKSHSNIS 201
           S      +P+P HP +P+   P+ P+      R S    S
Sbjct: 58  SSAHTVLIPQPLHPSVPRLGHPQWPFAWGSLXRSSSPQTS 97


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 197 VLKYCYVIFEMFYSICKDALGQAWVAGGGEVAA 295
           V+KY  +  E F S+ + A+G    AGG  + +
Sbjct: 268 VMKYAALATENFSSLLEPAVGTMTGAGGTAIVS 300


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 194 NVLKYCYVIFEMFYSICK 247
           +VL    + FE +Y+ICK
Sbjct: 157 SVLTILAISFERYYAICK 174


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 194 NVLKYCYVIFEMFYSICK 247
           +VL    + FE +Y+ICK
Sbjct: 157 SVLTILAISFERYYAICK 174


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 251 RPYILNKTFRKSHSNISKRSN 189
           RP ++++  R SH  +SK  N
Sbjct: 72  RPCVISRQLRVSHGCVSKILN 92


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -2

Query: 305 PARVPRPHHPQLPKPDPERP 246
           P   PRP      KP P RP
Sbjct: 251 PTPKPRPTKVSRRKPRPPRP 270


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 210 AM*FSKCFIQYVRTLW 257
           A+  S C+   VRT+W
Sbjct: 219 ALIISACYAVIVRTIW 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,916
Number of Sequences: 336
Number of extensions: 1923
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)