Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0097.Seq
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.62 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.6  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.0 bits (52), Expect = 0.62
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
 Frame = -1

Query: 673 KVSISI-QLVMIWVIQTYLI-----LFKNFK-----LTEISAAMNKFICNK 554
           K+SI+I  LV +W+ Q YL+     + + F      L+++ + +NK  C K
Sbjct: 194 KLSINIISLVQLWIFQLYLLILCDQILREFDQIVVILSKVKSILNKKCCEK 244


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 293 PRPHHPQPXKPDPERPYILN 234
           P PHH  P  P    P+ +N
Sbjct: 739 PHPHHQPPRNPVGTNPHDIN 758


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 293 PRPHHPQPXKPDPERPYILN 234
           P PHH  P  P    P+ +N
Sbjct: 631 PHPHHQPPRNPVGTNPHDIN 650


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 194 NVLKYCYVIFEMFYSICK 247
           +VL    + FE +Y+ICK
Sbjct: 157 SVLTILAISFERYYAICK 174


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 194 NVLKYCYVIFEMFYSICK 247
           +VL    + FE +Y+ICK
Sbjct: 157 SVLTILAISFERYYAICK 174


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 389  PVDIVDCAGDARVLTDQQCA 448
            P ++V C G   V  D  CA
Sbjct: 2231 PAEVVPCQGRLFVADDTNCA 2250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,952
Number of Sequences: 336
Number of extensions: 3413
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)