Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0081.Seq
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    27   0.11 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   1.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   6.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   6.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   6.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.2  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 306 LEKNVTDSNYFFIICNKPISVNYLFIE 226
           L KNVT ++  FI C+ PI +  L IE
Sbjct: 79  LMKNVTLNDVVFIFCSAPIIITILDIE 105


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +1

Query: 205 TRKNAIIFNKEVIDRYRFITYNEEIIRVCYIFF 303
           TR+ A + +++V     +I  N++  R+C++ F
Sbjct: 247 TRRIAAVASEKVTSEKSWIALNDDYNRLCHLCF 279


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 194 DSTIQERMQLSSIKR 238
           D+TIQE + L  IKR
Sbjct: 322 DATIQEMLDLGVIKR 336


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 253 RFITYNEEIIRVCYIFFEILA 315
           +F  +N  I+R  ++FF++ A
Sbjct: 262 QFYIHNALIVRALFLFFQLWA 282


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 253 RFITYNEEIIRVCYIFFEILA 315
           +F  +N  I+R  ++FF++ A
Sbjct: 258 QFYIHNALIVRALFLFFQLWA 278


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -2

Query: 456 SICLEIRNLNNLISLTMTSMFTSALSYI 373
           SIC  +   NN+  L M  +    ++Y+
Sbjct: 228 SICELVDAFNNIYGLAMLEIIIVVITYV 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,021
Number of Sequences: 336
Number of extensions: 2856
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)